Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm23752-201ENSMUST00000157584 115 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Gm22666-201ENSMUST00000158717 164 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Mir3092-201ENSMUST00000174954 96 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Gm23660-201ENSMUST00000178362 79 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Gm24088-201ENSMUST00000179100 79 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Gm28000-201ENSMUST00000184380 85 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Gm29229-201ENSMUST00000188874 323 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Mir7021-201ENSMUST00000197026 63 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Gm43402-201ENSMUST00000197159 159 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Gm44825-201ENSMUST00000207557 150 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Gm44598-201ENSMUST00000207566 150 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 AC153864.2-201ENSMUST00000220424 292 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC2.29□□□□□ -2.04
Trim58Q5NCC9 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Gm22866-201ENSMUST00000083947 177 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Gm42606-201ENSMUST00000114209 239 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Gm24275-201ENSMUST00000116780 146 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Gm13806-201ENSMUST00000117822 325 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Gm13457-201ENSMUST00000117885 267 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Gm26149-201ENSMUST00000157432 108 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Gm23548-201ENSMUST00000158963 106 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Mir7678-201ENSMUST00000185076 71 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Gm37399-201ENSMUST00000195224 416 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.28□□□□□ -2.04
Trim58Q5NCC9 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Gm22683-201ENSMUST00000082854 137 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Gm23727-201ENSMUST00000083352 164 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Mir137-201ENSMUST00000083635 73 ntBASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trim58Q5NCC9 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Gm24783-201ENSMUST00000157639 100 ntBASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Gm25486-201ENSMUST00000158726 63 ntBASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Gm16038-201ENSMUST00000159317 193 ntBASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Gm17062-201ENSMUST00000166987 461 ntBASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Mir6995-201ENSMUST00000183658 71 ntBASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Gm37778-201ENSMUST00000191732 190 ntBASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Gm45403-201ENSMUST00000209453 276 ntBASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Gm26457-201ENSMUST00000082678 78 ntBASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Gm23517-201ENSMUST00000082830 192 ntBASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Gm26164-201ENSMUST00000083793 104 ntBASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Gm26327-201ENSMUST00000093724 111 ntBASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Trim58Q5NCC9 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Gm14307-201ENSMUST00000118930 291 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Gm15183-201ENSMUST00000118933 348 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Gm26256-201ENSMUST00000122499 186 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Gm14297-201ENSMUST00000129110 291 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Gm23324-201ENSMUST00000157421 131 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Gm22389-201ENSMUST00000158193 301 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Gm23196-201ENSMUST00000158806 107 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Gm5224-201ENSMUST00000183060 350 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Gm20058-201ENSMUST00000186939 284 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Trbv6-201ENSMUST00000193743 276 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Gm18971-201ENSMUST00000197240 374 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Gm44446-201ENSMUST00000204864 255 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 AC116589.4-201ENSMUST00000222390 216 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Mir322-201ENSMUST00000083484 95 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
Trim58Q5NCC9 Gm650-201ENSMUST00000144428 1551 ntBASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Snord98-201ENSMUST00000116819 65 ntBASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Gm22151-201ENSMUST00000116963 58 ntBASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Gm12235-201ENSMUST00000118596 170 ntBASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Gm13518-201ENSMUST00000120018 233 ntBASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.25□□□□□ -2.05
Trim58Q5NCC9 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Gm25827-201ENSMUST00000157089 107 ntBASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Gm22843-201ENSMUST00000157710 134 ntBASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Gm27510-201ENSMUST00000158214 64 ntBASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Gm7953-201ENSMUST00000168278 469 ntBASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Gm22131-201ENSMUST00000178415 94 ntBASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Mir6917-201ENSMUST00000184111 61 ntBASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Gm44811-201ENSMUST00000209120 228 ntBASIC2.25□□□□□ -2.05
Trim58Q5NCC9 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 147.5 ms