Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Gm25541-201ENSMUST00000116888 126 ntBASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Gm14638-201ENSMUST00000121338 216 ntBASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Gm23331-201ENSMUST00000157423 108 ntBASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Gm20689-201ENSMUST00000176033 279 ntBASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Gm21894-201ENSMUST00000179631 546 ntBASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Gm28794-201ENSMUST00000185276 136 ntBASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Gm29134-201ENSMUST00000186579 126 ntBASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Gm28337-201ENSMUST00000190425 666 ntBASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Gm31123-201ENSMUST00000192094 666 ntBASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Gm43810-201ENSMUST00000201018 232 ntBASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Gm2628-201ENSMUST00000218019 426 ntBASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Mir410-201ENSMUST00000083563 81 ntBASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Upf3bQ3ULL6 Gm23422-201ENSMUST00000102000 107 ntBASIC1.39□□□□□ -2.19
Upf3bQ3ULL6 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Upf3bQ3ULL6 Gm23336-201ENSMUST00000117023 123 ntBASIC1.39□□□□□ -2.19
Upf3bQ3ULL6 Gm6025-201ENSMUST00000121517 201 ntBASIC1.39□□□□□ -2.19
Upf3bQ3ULL6 Gm24896-201ENSMUST00000122741 135 ntBASIC1.39□□□□□ -2.19
Upf3bQ3ULL6 Gm24480-201ENSMUST00000157442 103 ntBASIC1.39□□□□□ -2.19
Upf3bQ3ULL6 Gm24768-201ENSMUST00000158512 94 ntBASIC1.39□□□□□ -2.19
Upf3bQ3ULL6 Gm25936-201ENSMUST00000179952 114 ntBASIC1.39□□□□□ -2.19
Upf3bQ3ULL6 Gm21064-202ENSMUST00000190583 278 ntBASIC1.39□□□□□ -2.19
Upf3bQ3ULL6 Gm37923-201ENSMUST00000191624 161 ntBASIC1.39□□□□□ -2.19
Upf3bQ3ULL6 Gm44990-201ENSMUST00000203922 217 ntBASIC1.39□□□□□ -2.19
Upf3bQ3ULL6 Gm45116-201ENSMUST00000207392 275 ntBASIC1.39□□□□□ -2.19
Upf3bQ3ULL6 Gm32300-201ENSMUST00000221735 515 ntBASIC1.39□□□□□ -2.19
Upf3bQ3ULL6 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.39□□□□□ -2.19
Upf3bQ3ULL6 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.39□□□□□ -2.19
Upf3bQ3ULL6 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 Gm15861-201ENSMUST00000120979 339 ntBASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 Gm12779-201ENSMUST00000121496 143 ntBASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 Gm23981-201ENSMUST00000157136 106 ntBASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 Gm25059-201ENSMUST00000157367 117 ntBASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 Snord13-201ENSMUST00000157627 104 ntBASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 Mir6355-201ENSMUST00000183687 106 ntBASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 Mir6388-201ENSMUST00000184417 75 ntBASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 Gm44483-201ENSMUST00000197203 97 ntBASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 Gm25820-201ENSMUST00000198589 127 ntBASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 Mir3087-201ENSMUST00000199405 56 ntBASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 Gm25404-201ENSMUST00000082970 107 ntBASIC1.38□□□□□ -2.19
Upf3bQ3ULL6 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 Gm24889-201ENSMUST00000104388 132 ntBASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 Gm24677-201ENSMUST00000158755 150 ntBASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 Gm23090-201ENSMUST00000177331 78 ntBASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 Gm21754-201ENSMUST00000177550 479 ntBASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 Gm38333-201ENSMUST00000193608 604 ntBASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 Gm44011-201ENSMUST00000203336 394 ntBASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 Gm44870-201ENSMUST00000207291 357 ntBASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.37□□□□□ -2.19
Upf3bQ3ULL6 Gm26377-201ENSMUST00000102184 108 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Mir190b-201ENSMUST00000104803 80 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Gm14972-201ENSMUST00000121780 364 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Gm23000-201ENSMUST00000157083 139 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Gm23858-201ENSMUST00000158384 106 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Gm22075-201ENSMUST00000158599 192 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Gm9593-201ENSMUST00000166034 469 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Gm7925-201ENSMUST00000166690 401 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Mir3057-201ENSMUST00000175040 91 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Gm24862-201ENSMUST00000179103 79 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Gm23310-201ENSMUST00000179105 79 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Gm25461-201ENSMUST00000179293 79 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Gm23144-201ENSMUST00000180226 107 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Gm29397-201ENSMUST00000185205 333 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 AL929265.1-201ENSMUST00000213427 125 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Gm25589-201ENSMUST00000082502 166 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Gm23453-201ENSMUST00000083326 106 ntBASIC1.36□□□□□ -2.19
Upf3bQ3ULL6 Gm12102-201ENSMUST00000118251 604 ntBASIC1.35□□□□□ -2.19
Upf3bQ3ULL6 Gm24517-201ENSMUST00000122560 107 ntBASIC1.35□□□□□ -2.19
Upf3bQ3ULL6 Gm23589-201ENSMUST00000157660 105 ntBASIC1.35□□□□□ -2.19
Upf3bQ3ULL6 Gm27517-201ENSMUST00000184347 236 ntBASIC1.35□□□□□ -2.19
Upf3bQ3ULL6 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.35□□□□□ -2.19
Upf3bQ3ULL6 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.35□□□□□ -2.19
Upf3bQ3ULL6 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 139.9 ms