Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.96□□□□□ -2.1
Trim3Q9R1R2 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.96□□□□□ -2.1
Trim3Q9R1R2 Gm22656-201ENSMUST00000104199 171 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm11386-201ENSMUST00000117761 347 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm12433-201ENSMUST00000119659 255 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm13433-201ENSMUST00000121701 240 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm23016-201ENSMUST00000158431 62 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm25162-201ENSMUST00000158906 159 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm22192-201ENSMUST00000175128 85 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm21827-201ENSMUST00000178247 423 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm29352-201ENSMUST00000188054 544 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm28506-201ENSMUST00000189937 150 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm37377-201ENSMUST00000191733 304 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm5034-201ENSMUST00000199115 634 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm44024-201ENSMUST00000203008 476 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm44446-201ENSMUST00000204864 255 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm25632-201ENSMUST00000083112 85 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.95□□□□□ -2.1
Trim3Q9R1R2 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm12255-201ENSMUST00000117184 284 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm15281-201ENSMUST00000125181 351 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm26149-201ENSMUST00000157432 108 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm24783-201ENSMUST00000157639 100 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm24577-201ENSMUST00000158580 63 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm22891-201ENSMUST00000158641 164 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm24084-201ENSMUST00000175173 137 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm26430-201ENSMUST00000178054 107 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm27959-201ENSMUST00000185172 111 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm28740-201ENSMUST00000186142 215 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm43680-201ENSMUST00000199466 340 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm44182-201ENSMUST00000204052 115 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.94□□□□□ -2.1
Trim3Q9R1R2 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Trim3Q9R1R2 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.93□□□□□ -2.1
Trim3Q9R1R2 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.93□□□□□ -2.1
Trim3Q9R1R2 Gm24237-201ENSMUST00000157790 132 ntBASIC1.93□□□□□ -2.1
Trim3Q9R1R2 Gm22666-201ENSMUST00000158717 164 ntBASIC1.93□□□□□ -2.1
Trim3Q9R1R2 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.93□□□□□ -2.1
Trim3Q9R1R2 Gm37923-201ENSMUST00000191624 161 ntBASIC1.93□□□□□ -2.1
Trim3Q9R1R2 Gm45402-201ENSMUST00000211796 223 ntBASIC1.93□□□□□ -2.1
Trim3Q9R1R2 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.93□□□□□ -2.1
Trim3Q9R1R2 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.93□□□□□ -2.1
Trim3Q9R1R2 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.93□□□□□ -2.1
Trim3Q9R1R2 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Trim3Q9R1R2 Gm22978-201ENSMUST00000082607 160 ntBASIC1.93□□□□□ -2.1
Trim3Q9R1R2 Mir301-201ENSMUST00000083655 86 ntBASIC1.93□□□□□ -2.1
Trim3Q9R1R2 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.93□□□□□ -2.1
Trim3Q9R1R2 Gm7164-201ENSMUST00000117503 450 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Gm16242-201ENSMUST00000117741 334 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Gm13475-201ENSMUST00000119290 234 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Gm24857-201ENSMUST00000158061 310 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Gm26501-201ENSMUST00000178307 107 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Gm29134-201ENSMUST00000186579 126 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Gm28337-201ENSMUST00000190425 666 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Gm34073-201ENSMUST00000195736 212 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Gm42622-201ENSMUST00000197229 355 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Gm38395-201ENSMUST00000199904 830 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.92□□□□□ -2.1
Trim3Q9R1R2 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 CT025603.4-201ENSMUST00000225777 413 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Gm25402-201ENSMUST00000082966 131 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trim3Q9R1R2 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.92□□□□□ -2.1
Trim3Q9R1R2 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Gm25485-201ENSMUST00000104120 132 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Gm12646-201ENSMUST00000119144 238 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Gm12304-201ENSMUST00000120312 385 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Gm25392-201ENSMUST00000157335 297 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Gm25460-201ENSMUST00000157954 127 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Gm22136-201ENSMUST00000158751 268 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Mir7050-201ENSMUST00000184636 60 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Mir195b-201ENSMUST00000184814 97 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Gm28927-201ENSMUST00000191528 272 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 161.7 ms