Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm25391-201ENSMUST00000157342 134 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm23078-201ENSMUST00000157848 148 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm22836-201ENSMUST00000158441 61 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm23636-201ENSMUST00000175070 95 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Mir6382-201ENSMUST00000184055 110 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm28506-201ENSMUST00000189937 150 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm45232-201ENSMUST00000207811 162 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm20102-201ENSMUST00000222445 220 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Mir423-201ENSMUST00000083584 109 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm3867-201ENSMUST00000086108 279 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Mir452-201ENSMUST00000093629 85 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm14736-201ENSMUST00000121470 336 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm24630-201ENSMUST00000122768 106 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm20794-201ENSMUST00000177626 628 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm24713-201ENSMUST00000178850 107 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm22631-201ENSMUST00000179656 94 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm21171-201ENSMUST00000180048 673 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm25448-201ENSMUST00000180065 107 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm27385-201ENSMUST00000184747 104 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm10193-201ENSMUST00000188288 231 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm37757-201ENSMUST00000193072 210 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm44726-201ENSMUST00000203427 217 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Gm23515-201ENSMUST00000082829 107 ntBASIC1.55□□□□□ -2.16
Col4a4Q9QZR9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Gm5287-201ENSMUST00000120666 598 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Gm23033-201ENSMUST00000157996 134 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Gm23068-201ENSMUST00000158239 293 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Gm25434-201ENSMUST00000158278 167 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Gm23704-201ENSMUST00000158844 340 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Gm9071-201ENSMUST00000165915 474 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Gm22290-201ENSMUST00000177655 107 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Gm22583-201ENSMUST00000178031 107 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Gm11395-201ENSMUST00000181011 499 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Gm27520-201ENSMUST00000184872 81 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Gm28283-201ENSMUST00000185509 178 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Gm23093-201ENSMUST00000083450 102 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Mir10b-201ENSMUST00000083566 68 ntBASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Col4a4Q9QZR9 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Gm42606-201ENSMUST00000114209 239 ntBASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Gm25621-201ENSMUST00000157223 114 ntBASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Gm26049-201ENSMUST00000157313 108 ntBASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Gm26348-201ENSMUST00000157528 240 ntBASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Gm25909-201ENSMUST00000157619 121 ntBASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Gm24853-201ENSMUST00000158026 121 ntBASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Mir5129-201ENSMUST00000174938 78 ntBASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Gm28090-201ENSMUST00000189458 664 ntBASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Gm42924-201ENSMUST00000197261 185 ntBASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 mt-Td-201ENSMUST00000082404 70 ntBASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Gm26056-201ENSMUST00000083043 104 ntBASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Gm22287-201ENSMUST00000083197 107 ntBASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Mir208a-201ENSMUST00000083498 83 ntBASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Gm23503-201ENSMUST00000083903 107 ntBASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Col4a4Q9QZR9 Gm24280-201ENSMUST00000104237 134 ntBASIC1.52□□□□□ -2.17
Col4a4Q9QZR9 Gm25787-201ENSMUST00000104709 92 ntBASIC1.52□□□□□ -2.17
Col4a4Q9QZR9 Gm22032-201ENSMUST00000116946 116 ntBASIC1.52□□□□□ -2.17
Col4a4Q9QZR9 Gm13331-201ENSMUST00000117500 448 ntBASIC1.52□□□□□ -2.17
Col4a4Q9QZR9 Gm14307-201ENSMUST00000118930 291 ntBASIC1.52□□□□□ -2.17
Col4a4Q9QZR9 Gm13804-201ENSMUST00000119552 172 ntBASIC1.52□□□□□ -2.17
Col4a4Q9QZR9 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.52□□□□□ -2.17
Col4a4Q9QZR9 Gm14694-201ENSMUST00000121856 282 ntBASIC1.52□□□□□ -2.17
Col4a4Q9QZR9 n-R5s192-201ENSMUST00000122577 119 ntBASIC1.52□□□□□ -2.17
Col4a4Q9QZR9 Gm14297-201ENSMUST00000129110 291 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 205.8 ms