Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Gm23895-201ENSMUST00000158108 160 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Gm17117-201ENSMUST00000163665 299 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Gm25450-201ENSMUST00000179144 107 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Gm28825-201ENSMUST00000186233 238 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Gm18341-201ENSMUST00000197538 622 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Mir3535-201ENSMUST00000197651 147 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Gm44524-201ENSMUST00000203899 271 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Gm6842-201ENSMUST00000211361 390 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 AC155712.1-201ENSMUST00000219704 160 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Gm13443-201ENSMUST00000120770 555 ntBASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Gm25280-201ENSMUST00000157269 101 ntBASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Gm27579-201ENSMUST00000158113 63 ntBASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Gm37763-201ENSMUST00000193445 120 ntBASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Gm30534-201ENSMUST00000217928 207 ntBASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Gm46389-201ENSMUST00000223199 392 ntBASIC3.37□□□□□ -1.87
Brf1Q8CFK2 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Gm23453-201ENSMUST00000083326 106 ntBASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.37□□□□□ -1.87
Brf1Q8CFK2 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Gm25539-201ENSMUST00000116886 122 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Gm15183-201ENSMUST00000118933 348 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 DQ267100-201ENSMUST00000122600 72 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Gm23331-201ENSMUST00000157423 108 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Gm23474-201ENSMUST00000158884 75 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Gm8292-201ENSMUST00000162574 396 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Gm4479-201ENSMUST00000178807 171 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Gm38060-201ENSMUST00000194822 464 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Gm43680-201ENSMUST00000199466 340 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.36□□□□□ -1.87
Brf1Q8CFK2 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Gm10298-201ENSMUST00000074801 265 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 mt-Ti-201ENSMUST00000082393 69 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 AF357341-201ENSMUST00000083088 75 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Mir193a-201ENSMUST00000083461 66 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Mir32-201ENSMUST00000083610 70 ntBASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Brf1Q8CFK2 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.35□□□□□ -1.87
Brf1Q8CFK2 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Snord14c-201ENSMUST00000101927 86 ntBASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Gm25500-201ENSMUST00000104426 123 ntBASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Gm26256-201ENSMUST00000122499 186 ntBASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Gm24879-201ENSMUST00000158386 143 ntBASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Gm24681-201ENSMUST00000158760 107 ntBASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Gm7582-201ENSMUST00000160831 603 ntBASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Gm37923-201ENSMUST00000191624 161 ntBASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Gm37715-201ENSMUST00000193206 235 ntBASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Gm44337-201ENSMUST00000196553 114 ntBASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Gm22062-201ENSMUST00000082563 107 ntBASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Brf1Q8CFK2 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Brf1Q8CFK2 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Brf1Q8CFK2 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.34□□□□□ -1.87
Brf1Q8CFK2 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Brf1Q8CFK2 Gm23183-201ENSMUST00000122595 323 ntBASIC3.34□□□□□ -1.87
Brf1Q8CFK2 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.34□□□□□ -1.87
Brf1Q8CFK2 Gm24056-201ENSMUST00000158617 146 ntBASIC3.34□□□□□ -1.87
Brf1Q8CFK2 Gm42570-201ENSMUST00000195937 292 ntBASIC3.34□□□□□ -1.87
Brf1Q8CFK2 Gm43521-201ENSMUST00000197838 255 ntBASIC3.34□□□□□ -1.87
Brf1Q8CFK2 Gm43107-201ENSMUST00000198729 255 ntBASIC3.34□□□□□ -1.87
Brf1Q8CFK2 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.34□□□□□ -1.87
Brf1Q8CFK2 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Brf1Q8CFK2 Gm25078-201ENSMUST00000082530 107 ntBASIC3.34□□□□□ -1.87
Brf1Q8CFK2 Gm23723-201ENSMUST00000082996 132 ntBASIC3.34□□□□□ -1.87
Brf1Q8CFK2 Gm23731-201ENSMUST00000083749 107 ntBASIC3.34□□□□□ -1.87
Brf1Q8CFK2 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Brf1Q8CFK2 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 147.8 ms