Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm27545-201ENSMUST00000184755 202 ntBASIC3.19□□□□□ -1.9
Trim9Q8C7M3 Gm7329-201ENSMUST00000185915 210 ntBASIC3.19□□□□□ -1.9
Trim9Q8C7M3 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.19□□□□□ -1.9
Trim9Q8C7M3 Gm43704-201ENSMUST00000196164 496 ntBASIC3.19□□□□□ -1.9
Trim9Q8C7M3 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.19□□□□□ -1.9
Trim9Q8C7M3 Gm44010-201ENSMUST00000204432 331 ntBASIC3.19□□□□□ -1.9
Trim9Q8C7M3 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC3.19□□□□□ -1.9
Trim9Q8C7M3 Gm44657-201ENSMUST00000208568 450 ntBASIC3.19□□□□□ -1.9
Trim9Q8C7M3 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.19□□□□□ -1.9
Trim9Q8C7M3 Gm22973-201ENSMUST00000083298 191 ntBASIC3.19□□□□□ -1.9
Trim9Q8C7M3 Gm23454-201ENSMUST00000083332 133 ntBASIC3.19□□□□□ -1.9
Trim9Q8C7M3 Gm23042-201ENSMUST00000083866 101 ntBASIC3.19□□□□□ -1.9
Trim9Q8C7M3 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.19□□□□□ -1.9
Trim9Q8C7M3 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trim9Q8C7M3 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Trim9Q8C7M3 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Gm25466-201ENSMUST00000103995 132 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Gm25308-201ENSMUST00000104171 158 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Gm12721-201ENSMUST00000120621 268 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Gm12071-201ENSMUST00000121968 469 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Gm22984-201ENSMUST00000122751 122 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Gm24787-201ENSMUST00000157380 123 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Mir3106-201ENSMUST00000175401 82 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Snord93-201ENSMUST00000175580 71 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Mir7k-201ENSMUST00000184115 110 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Gm27421-201ENSMUST00000184729 167 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Gm19244-201ENSMUST00000204340 253 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Gm6842-201ENSMUST00000211361 390 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Gm25078-201ENSMUST00000082530 107 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Gm24948-201ENSMUST00000082866 207 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.18□□□□□ -1.9
Trim9Q8C7M3 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Mir541-201ENSMUST00000102097 90 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Gm14652-201ENSMUST00000118479 235 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Gm15162-201ENSMUST00000119325 283 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Gm15272-201ENSMUST00000120865 233 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Gm12617-201ENSMUST00000121268 381 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Gm25391-201ENSMUST00000157342 134 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Gm22145-201ENSMUST00000157396 148 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Gm25490-201ENSMUST00000158734 130 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Gm26287-201ENSMUST00000158887 81 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Gm38183-201ENSMUST00000193189 205 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Gm44519-201ENSMUST00000206486 122 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.17□□□□□ -1.9
Trim9Q8C7M3 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 AC160863.1-201ENSMUST00000218412 317 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Gm22247-201ENSMUST00000082476 131 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Gm22062-201ENSMUST00000082563 107 ntBASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim9Q8C7M3 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Gm23747-201ENSMUST00000104228 131 ntBASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Gm23911-201ENSMUST00000104596 134 ntBASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Gm14838-201ENSMUST00000118913 248 ntBASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Gm13541-201ENSMUST00000119519 283 ntBASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Gm23380-201ENSMUST00000158448 103 ntBASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Gm2962-201ENSMUST00000159266 336 ntBASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Gm17186-201ENSMUST00000171742 456 ntBASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.16□□□□□ -1.9
Trim9Q8C7M3 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trim9Q8C7M3 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.16□□□□□ -1.9
Trim9Q8C7M3 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
Trim9Q8C7M3 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Trim9Q8C7M3 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Trim9Q8C7M3 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
Trim9Q8C7M3 Gm15846-201ENSMUST00000116022 320 ntBASIC3.15□□□□□ -1.91
Trim9Q8C7M3 Gm12155-201ENSMUST00000121267 160 ntBASIC3.15□□□□□ -1.91
Trim9Q8C7M3 Gm26277-201ENSMUST00000157097 152 ntBASIC3.15□□□□□ -1.91
Trim9Q8C7M3 Gm23716-201ENSMUST00000157348 144 ntBASIC3.15□□□□□ -1.91
Trim9Q8C7M3 Gm23641-201ENSMUST00000157857 101 ntBASIC3.15□□□□□ -1.91
Trim9Q8C7M3 Gm22447-201ENSMUST00000158155 92 ntBASIC3.15□□□□□ -1.91
Trim9Q8C7M3 Gm27928-201ENSMUST00000183747 256 ntBASIC3.15□□□□□ -1.91
Trim9Q8C7M3 Gm29657-201ENSMUST00000189807 342 ntBASIC3.15□□□□□ -1.91
Trim9Q8C7M3 Gm37081-201ENSMUST00000192034 196 ntBASIC3.15□□□□□ -1.91
Trim9Q8C7M3 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC3.15□□□□□ -1.91
Trim9Q8C7M3 Gm9795-201ENSMUST00000062156 693 ntBASIC3.15□□□□□ -1.91
Trim9Q8C7M3 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.15□□□□□ -1.91
Trim9Q8C7M3 Gm24121-201ENSMUST00000102029 106 ntBASIC3.14□□□□□ -1.91
Trim9Q8C7M3 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.14□□□□□ -1.91
Trim9Q8C7M3 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 171.3 ms