Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm24014-201ENSMUST00000157728 157 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm23642-201ENSMUST00000157858 258 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm23112-201ENSMUST00000158606 125 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm24512-201ENSMUST00000174963 65 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm27582-201ENSMUST00000184084 126 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm43993-201ENSMUST00000203972 247 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm25634-201ENSMUST00000082667 105 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm25813-201ENSMUST00000082748 191 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm24950-201ENSMUST00000082768 191 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm25480-201ENSMUST00000083217 133 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm23971-201ENSMUST00000083317 191 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm23849-201ENSMUST00000083833 191 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm26316-201ENSMUST00000083886 191 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ubp1Q811S7 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ubp1Q811S7 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 Gm13831-201ENSMUST00000118764 302 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 Gm22281-201ENSMUST00000157198 103 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 Gm23753-201ENSMUST00000157575 149 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 Gm22120-201ENSMUST00000175590 70 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 Mir713-201ENSMUST00000178651 108 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 Gm10292-201ENSMUST00000183142 581 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 Mir6975-201ENSMUST00000184879 61 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 Gm43563-201ENSMUST00000196761 198 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 AC154282.1-201ENSMUST00000223154 265 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ubp1Q811S7 Gm22421-201ENSMUST00000083058 107 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Ubp1Q811S7 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.76□□□□□ -1.81
Ubp1Q811S7 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ubp1Q811S7 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ubp1Q811S7 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Ubp1Q811S7 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
Ubp1Q811S7 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Ubp1Q811S7 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Ubp1Q811S7 Gm24119-201ENSMUST00000103979 246 ntBASIC3.75□□□□□ -1.81
Ubp1Q811S7 Gm26018-201ENSMUST00000104406 128 ntBASIC3.75□□□□□ -1.81
Ubp1Q811S7 Gm14816-201ENSMUST00000117174 294 ntBASIC3.75□□□□□ -1.81
Ubp1Q811S7 Mir1936-201ENSMUST00000158699 93 ntBASIC3.75□□□□□ -1.81
Ubp1Q811S7 Gm22800-201ENSMUST00000175627 94 ntBASIC3.75□□□□□ -1.81
Ubp1Q811S7 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ubp1Q811S7 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ubp1Q811S7 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ubp1Q811S7 Gm17522-201ENSMUST00000178144 498 ntBASIC3.75□□□□□ -1.81
Ubp1Q811S7 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ubp1Q811S7 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ubp1Q811S7 Gm23816-201ENSMUST00000179617 132 ntBASIC3.75□□□□□ -1.81
Ubp1Q811S7 Gm33866-201ENSMUST00000196911 289 ntBASIC3.75□□□□□ -1.81
Ubp1Q811S7 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ubp1Q811S7 Gm43199-201ENSMUST00000200019 307 ntBASIC3.75□□□□□ -1.81
Ubp1Q811S7 Gm18617-201ENSMUST00000222311 259 ntBASIC3.75□□□□□ -1.81
Ubp1Q811S7 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.75□□□□□ -1.81
Ubp1Q811S7 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.75□□□□□ -1.81
Ubp1Q811S7 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.75□□□□□ -1.81
Ubp1Q811S7 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.75□□□□□ -1.81
Ubp1Q811S7 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ubp1Q811S7 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ubp1Q811S7 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ubp1Q811S7 Gm26418-201ENSMUST00000104275 137 ntBASIC3.74□□□□□ -1.81
Ubp1Q811S7 Gm22051-201ENSMUST00000117002 127 ntBASIC3.74□□□□□ -1.81
Ubp1Q811S7 Gm13314-201ENSMUST00000118742 335 ntBASIC3.74□□□□□ -1.81
Ubp1Q811S7 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.74□□□□□ -1.81
Ubp1Q811S7 Gm24911-201ENSMUST00000157292 136 ntBASIC3.74□□□□□ -1.81
Ubp1Q811S7 Gm24480-201ENSMUST00000157442 103 ntBASIC3.74□□□□□ -1.81
Ubp1Q811S7 Mir466b-1-201ENSMUST00000177988 82 ntBASIC3.74□□□□□ -1.81
Ubp1Q811S7 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.74□□□□□ -1.81
Ubp1Q811S7 Gm29553-201ENSMUST00000189692 279 ntBASIC3.74□□□□□ -1.81
Ubp1Q811S7 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.74□□□□□ -1.81
Ubp1Q811S7 Gm44024-201ENSMUST00000203008 476 ntBASIC3.74□□□□□ -1.81
Ubp1Q811S7 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.74□□□□□ -1.81
Ubp1Q811S7 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.74□□□□□ -1.81
Ubp1Q811S7 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.74□□□□□ -1.81
Ubp1Q811S7 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.74□□□□□ -1.81
Ubp1Q811S7 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.74□□□□□ -1.81
Ubp1Q811S7 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.74□□□□□ -1.81
Ubp1Q811S7 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.74□□□□□ -1.81
Ubp1Q811S7 Gm25081-201ENSMUST00000082534 108 ntBASIC3.74□□□□□ -1.81
Ubp1Q811S7 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
Ubp1Q811S7 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ubp1Q811S7 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ubp1Q811S7 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ubp1Q811S7 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ubp1Q811S7 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.73□□□□□ -1.81
Ubp1Q811S7 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.73□□□□□ -1.81
Ubp1Q811S7 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Ubp1Q811S7 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ubp1Q811S7 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ubp1Q811S7 Gm14881-201ENSMUST00000120366 372 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 184.4 ms