Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm25327-201ENSMUST00000180263 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm26058-201ENSMUST00000180294 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm22418-201ENSMUST00000180326 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm43529-201ENSMUST00000199178 412 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 AC192333.1-201ENSMUST00000224573 376 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm23629-201ENSMUST00000082465 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm23924-201ENSMUST00000082474 108 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm22246-201ENSMUST00000082478 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm22749-201ENSMUST00000082490 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm22747-201ENSMUST00000082495 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm22063-201ENSMUST00000082560 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm25801-201ENSMUST00000082638 106 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm23057-201ENSMUST00000082801 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm26328-201ENSMUST00000082821 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm26331-201ENSMUST00000082824 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm24205-201ENSMUST00000082953 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm25405-201ENSMUST00000082973 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm22628-201ENSMUST00000082988 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm26324-201ENSMUST00000083073 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm24535-201ENSMUST00000083140 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm26496-201ENSMUST00000083150 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm26127-201ENSMUST00000083193 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm24456-201ENSMUST00000083198 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm24458-201ENSMUST00000083204 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm24018-201ENSMUST00000083232 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm25794-201ENSMUST00000083286 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm25790-201ENSMUST00000083293 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm22295-201ENSMUST00000083311 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm25127-201ENSMUST00000083336 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm25583-201ENSMUST00000083413 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm25577-201ENSMUST00000083414 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm24414-201ENSMUST00000083434 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm24861-201ENSMUST00000083459 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm24803-201ENSMUST00000083693 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm23103-201ENSMUST00000083725 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm22580-201ENSMUST00000083727 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm24260-201ENSMUST00000083741 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm23732-201ENSMUST00000083751 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm22682-201ENSMUST00000083854 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm25869-201ENSMUST00000083855 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm24693-201ENSMUST00000083885 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm26317-201ENSMUST00000083894 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm22352-201ENSMUST00000083917 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm24448-201ENSMUST00000083979 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm22798-201ENSMUST00000083992 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm26427-201ENSMUST00000093648 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm22886-201ENSMUST00000093714 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm22170-201ENSMUST00000097247 107 ntBASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trim58Q5NCC9 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Gm22779-201ENSMUST00000104085 107 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Gm12765-201ENSMUST00000117273 615 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Gm25051-201ENSMUST00000158602 249 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Gm26501-201ENSMUST00000178307 107 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Gm37128-201ENSMUST00000192599 232 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Gm9402-201ENSMUST00000196849 388 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Gm44844-201ENSMUST00000207242 336 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Gm25257-201ENSMUST00000083907 110 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Mir452-201ENSMUST00000093629 85 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.31□□□□□ -2.04
Trim58Q5NCC9 Gm11065-201ENSMUST00000111462 228 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Gm16242-201ENSMUST00000117741 334 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Gm12926-201ENSMUST00000121158 409 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Trav20-201ENSMUST00000142754 347 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Gm23713-201ENSMUST00000157353 70 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Gm24192-201ENSMUST00000157978 145 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Gm22615-201ENSMUST00000158102 70 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Mir6379-201ENSMUST00000183392 115 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Mir6371-201ENSMUST00000184470 111 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Gm37054-201ENSMUST00000193481 543 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Gm34073-201ENSMUST00000195736 212 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Gm43284-201ENSMUST00000200103 253 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Gm43472-201ENSMUST00000200175 154 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trim58Q5NCC9 CT025602.1-201ENSMUST00000227281 382 ntBASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trim58Q5NCC9 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Gm15029-201ENSMUST00000119742 199 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Gm14574-201ENSMUST00000120644 279 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Gm14678-201ENSMUST00000121396 482 ntBASIC2.29□□□□□ -2.04
Trim58Q5NCC9 Gm11254-201ENSMUST00000122368 653 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 227.4 ms