Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Gm24403-201ENSMUST00000104616 130 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Gm12335-201ENSMUST00000119738 327 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Gm15733-201ENSMUST00000132957 242 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Gm22320-201ENSMUST00000157149 312 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Gm25220-201ENSMUST00000157546 95 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Gm22840-201ENSMUST00000158444 136 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Gm27285-201ENSMUST00000183875 127 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Gm7329-201ENSMUST00000185915 210 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Gm43193-201ENSMUST00000197732 441 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Gm44922-201ENSMUST00000206690 90 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Mir132-201ENSMUST00000083603 66 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Mir323-201ENSMUST00000083683 86 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Gm25651-201ENSMUST00000083782 119 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Rnft1Q9DCN7 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm12025-201ENSMUST00000117768 144 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm23540-201ENSMUST00000157543 164 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm27592-201ENSMUST00000157729 126 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm23641-201ENSMUST00000157857 101 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm24997-201ENSMUST00000157910 105 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm23196-201ENSMUST00000158806 107 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm17166-201ENSMUST00000172006 431 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm22174-201ENSMUST00000175050 125 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm22692-201ENSMUST00000175055 125 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm27634-201ENSMUST00000175060 126 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm22460-201ENSMUST00000175269 124 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm25535-201ENSMUST00000175364 125 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm24365-201ENSMUST00000175384 125 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm44310-201ENSMUST00000175424 126 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm22639-201ENSMUST00000175591 125 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm22910-201ENSMUST00000178568 132 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm24979-201ENSMUST00000178626 126 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm23571-201ENSMUST00000180073 127 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm27743-201ENSMUST00000185136 126 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm37361-201ENSMUST00000194345 132 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm18433-202ENSMUST00000195682 196 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm24410-201ENSMUST00000083433 107 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Gm23850-201ENSMUST00000083830 169 ntBASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Rnft1Q9DCN7 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm14894-201ENSMUST00000117170 270 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm6071-201ENSMUST00000119561 440 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm13992-201ENSMUST00000120558 156 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm13210-201ENSMUST00000121483 273 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm15065-201ENSMUST00000121699 273 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm26026-201ENSMUST00000122726 123 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm22217-201ENSMUST00000157556 313 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm26141-201ENSMUST00000175299 126 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm24308-201ENSMUST00000177773 114 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm27535-201ENSMUST00000183814 157 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm37449-201ENSMUST00000193016 270 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm18658-201ENSMUST00000195558 270 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm45420-201ENSMUST00000211243 425 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm6796-201ENSMUST00000211919 243 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 AC192091.2-201ENSMUST00000217869 117 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm10813-201ENSMUST00000099936 90 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Rnft1Q9DCN7 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Rnft1Q9DCN7 Gm23472-201ENSMUST00000101806 191 ntBASIC3.18□□□□□ -1.9
Rnft1Q9DCN7 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
Rnft1Q9DCN7 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Rnft1Q9DCN7 Gm26423-201ENSMUST00000104277 128 ntBASIC3.18□□□□□ -1.9
Rnft1Q9DCN7 Gm22026-201ENSMUST00000122735 281 ntBASIC3.18□□□□□ -1.9
Rnft1Q9DCN7 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 264.7 ms