Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm23297-201ENSMUST00000083184 127 ntBASIC3.18□□□□□ -1.9
Pcdha9Q91Y11 Gm25651-201ENSMUST00000083782 119 ntBASIC3.18□□□□□ -1.9
Pcdha9Q91Y11 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Pcdha9Q91Y11 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Pcdha9Q91Y11 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm24282-201ENSMUST00000104232 66 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm11572-201ENSMUST00000119164 120 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm12934-201ENSMUST00000119221 343 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm11794-201ENSMUST00000119446 237 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm23355-201ENSMUST00000177614 107 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm25450-201ENSMUST00000179144 107 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm23148-201ENSMUST00000180367 107 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm38060-201ENSMUST00000194822 464 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm43239-201ENSMUST00000200131 201 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm9370-201ENSMUST00000222787 609 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm25258-201ENSMUST00000083049 107 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Mir32-201ENSMUST00000083610 70 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm23731-201ENSMUST00000083749 107 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Gm10222-201ENSMUST00000088336 294 ntBASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Pcdha9Q91Y11 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm15526-201ENSMUST00000112504 204 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm14894-201ENSMUST00000117170 270 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm13504-201ENSMUST00000117490 316 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm12617-201ENSMUST00000121268 381 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm13210-201ENSMUST00000121483 273 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm15065-201ENSMUST00000121699 273 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm15733-201ENSMUST00000132957 242 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm24787-201ENSMUST00000157380 123 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm22961-201ENSMUST00000157964 106 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Mir3106-201ENSMUST00000175401 82 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm27700-201ENSMUST00000185003 81 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm37449-201ENSMUST00000193016 270 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm18658-201ENSMUST00000195558 270 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm42570-201ENSMUST00000195937 292 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm44337-201ENSMUST00000196553 114 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm43680-201ENSMUST00000199466 340 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 AC154271.1-201ENSMUST00000224780 383 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Gm26497-201ENSMUST00000083146 107 ntBASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Pcdha9Q91Y11 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Pcdha9Q91Y11 Gm15215-201ENSMUST00000117773 489 ntBASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Gm15002-201ENSMUST00000118406 452 ntBASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Gm9119-201ENSMUST00000118866 495 ntBASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Gm13729-201ENSMUST00000120328 406 ntBASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Gm26256-201ENSMUST00000122499 186 ntBASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Gm24138-201ENSMUST00000157572 114 ntBASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Gm22447-201ENSMUST00000158155 92 ntBASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Gm24056-201ENSMUST00000158617 146 ntBASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Gm37281-201ENSMUST00000192412 439 ntBASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Gm45344-201ENSMUST00000211610 341 ntBASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Gm25078-201ENSMUST00000082530 107 ntBASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Gm22443-201ENSMUST00000082890 107 ntBASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Pcdha9Q91Y11 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Gm22023-201ENSMUST00000104354 130 ntBASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Gm24890-201ENSMUST00000104389 102 ntBASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Gm22322-201ENSMUST00000157151 111 ntBASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Gm24909-201ENSMUST00000157290 280 ntBASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Gm23331-201ENSMUST00000157423 108 ntBASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Gm8292-201ENSMUST00000162574 396 ntBASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Gm24308-201ENSMUST00000177773 114 ntBASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Gm21893-201ENSMUST00000179119 397 ntBASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Gm27796-201ENSMUST00000183863 261 ntBASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Gm2719-201ENSMUST00000191929 444 ntBASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Gm43978-201ENSMUST00000203491 451 ntBASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 Gm45365-201ENSMUST00000209489 256 ntBASIC3.14□□□□□ -1.91
Pcdha9Q91Y11 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 133.4 ms