Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Gm24909-201ENSMUST00000157290 280 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Snord93-201ENSMUST00000175580 71 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Gm2719-201ENSMUST00000191929 444 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Gm43583-201ENSMUST00000199235 303 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 AC151833.1-201ENSMUST00000227752 574 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Gm22507-201ENSMUST00000082773 160 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Gm25202-201ENSMUST00000082838 191 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Snord14d-201ENSMUST00000083424 86 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
Brf1Q8CFK2 Gm25728-201ENSMUST00000104525 159 ntBASIC3.43□□□□□ -1.86
Brf1Q8CFK2 Gm14020-201ENSMUST00000118165 662 ntBASIC3.43□□□□□ -1.86
Brf1Q8CFK2 Gm12617-201ENSMUST00000121268 381 ntBASIC3.43□□□□□ -1.86
Brf1Q8CFK2 Gm23886-201ENSMUST00000122684 313 ntBASIC3.43□□□□□ -1.86
Brf1Q8CFK2 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Brf1Q8CFK2 Gm24348-201ENSMUST00000158710 130 ntBASIC3.43□□□□□ -1.86
Brf1Q8CFK2 Gm25490-201ENSMUST00000158734 130 ntBASIC3.43□□□□□ -1.86
Brf1Q8CFK2 Gm27747-201ENSMUST00000184707 85 ntBASIC3.43□□□□□ -1.86
Brf1Q8CFK2 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.43□□□□□ -1.86
Brf1Q8CFK2 Gm43415-201ENSMUST00000201934 750 ntBASIC3.43□□□□□ -1.86
Brf1Q8CFK2 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.43□□□□□ -1.86
Brf1Q8CFK2 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.43□□□□□ -1.86
Brf1Q8CFK2 Gm26497-201ENSMUST00000083146 107 ntBASIC3.43□□□□□ -1.86
Brf1Q8CFK2 Mir137-201ENSMUST00000083635 73 ntBASIC3.43□□□□□ -1.86
Brf1Q8CFK2 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Brf1Q8CFK2 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
Brf1Q8CFK2 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Brf1Q8CFK2 Gm15714-201ENSMUST00000117168 250 ntBASIC3.42□□□□□ -1.86
Brf1Q8CFK2 Gm13729-201ENSMUST00000120328 406 ntBASIC3.42□□□□□ -1.86
Brf1Q8CFK2 Gm27723-201ENSMUST00000157398 63 ntBASIC3.42□□□□□ -1.86
Brf1Q8CFK2 Gm23355-201ENSMUST00000177614 107 ntBASIC3.42□□□□□ -1.86
Brf1Q8CFK2 Gm23148-201ENSMUST00000180367 107 ntBASIC3.42□□□□□ -1.86
Brf1Q8CFK2 Gm27249-201ENSMUST00000185049 328 ntBASIC3.42□□□□□ -1.86
Brf1Q8CFK2 Igkv15-102-201ENSMUST00000197885 287 ntBASIC3.42□□□□□ -1.86
Brf1Q8CFK2 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.42□□□□□ -1.86
Brf1Q8CFK2 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.42□□□□□ -1.86
Brf1Q8CFK2 Gm25258-201ENSMUST00000083049 107 ntBASIC3.42□□□□□ -1.86
Brf1Q8CFK2 Gm23727-201ENSMUST00000083352 164 ntBASIC3.42□□□□□ -1.86
Brf1Q8CFK2 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Gm24671-201ENSMUST00000104159 158 ntBASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Gm15272-201ENSMUST00000120865 233 ntBASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Gm26027-201ENSMUST00000122725 268 ntBASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Gm24443-201ENSMUST00000157242 132 ntBASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Gm22766-201ENSMUST00000158372 99 ntBASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Gm16111-201ENSMUST00000162128 285 ntBASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Gm27402-201ENSMUST00000183890 120 ntBASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Gm37713-201ENSMUST00000191746 198 ntBASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Gm43239-201ENSMUST00000200131 201 ntBASIC3.41□□□□□ -1.86
Brf1Q8CFK2 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Gm10088-201ENSMUST00000074116 423 ntBASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Gm22571-201ENSMUST00000082984 70 ntBASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Gm26314-201ENSMUST00000083891 107 ntBASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.41□□□□□ -1.86
Brf1Q8CFK2 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Brf1Q8CFK2 Gm24629-201ENSMUST00000122762 89 ntBASIC3.4□□□□□ -1.87
Brf1Q8CFK2 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.4□□□□□ -1.87
Brf1Q8CFK2 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Brf1Q8CFK2 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.4□□□□□ -1.87
Brf1Q8CFK2 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC3.4□□□□□ -1.87
Brf1Q8CFK2 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.4□□□□□ -1.87
Brf1Q8CFK2 AC154271.1-201ENSMUST00000224780 383 ntBASIC3.4□□□□□ -1.87
Brf1Q8CFK2 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.4□□□□□ -1.87
Brf1Q8CFK2 Gm24316-201ENSMUST00000083041 107 ntBASIC3.4□□□□□ -1.87
Brf1Q8CFK2 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Brf1Q8CFK2 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Gm26500-201ENSMUST00000101867 106 ntBASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Gm14774-201ENSMUST00000117857 536 ntBASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Gm26277-201ENSMUST00000157097 152 ntBASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Gm23829-201ENSMUST00000157392 270 ntBASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Gm22141-201ENSMUST00000157403 277 ntBASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Gm22447-201ENSMUST00000158155 92 ntBASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Gm30341-201ENSMUST00000194363 289 ntBASIC3.39□□□□□ -1.87
Brf1Q8CFK2 AC145736.2-201ENSMUST00000216305 365 ntBASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Gm40810-201ENSMUST00000219149 253 ntBASIC3.39□□□□□ -1.87
Brf1Q8CFK2 CT030166.2-201ENSMUST00000222021 368 ntBASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Gm25651-201ENSMUST00000083782 119 ntBASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Brf1Q8CFK2 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Brf1Q8CFK2 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Gm9119-201ENSMUST00000118866 495 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Gm11572-201ENSMUST00000119164 120 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Gm12934-201ENSMUST00000119221 343 ntBASIC3.38□□□□□ -1.87
Brf1Q8CFK2 Gm12793-201ENSMUST00000119268 292 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 178.1 ms