Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm6105-201ENSMUST00000200580 624 ntBASIC3.81□□□□□ -1.8
Ubp1Q811S7 Gm44459-201ENSMUST00000203926 160 ntBASIC3.81□□□□□ -1.8
Ubp1Q811S7 Gm45031-201ENSMUST00000206800 288 ntBASIC3.81□□□□□ -1.8
Ubp1Q811S7 Gm45162-201ENSMUST00000209013 618 ntBASIC3.81□□□□□ -1.8
Ubp1Q811S7 Gm45539-201ENSMUST00000210313 428 ntBASIC3.81□□□□□ -1.8
Ubp1Q811S7 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.81□□□□□ -1.8
Ubp1Q811S7 Gm23518-201ENSMUST00000082835 153 ntBASIC3.81□□□□□ -1.8
Ubp1Q811S7 Mir30e-201ENSMUST00000083475 92 ntBASIC3.81□□□□□ -1.8
Ubp1Q811S7 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ubp1Q811S7 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ubp1Q811S7 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ubp1Q811S7 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ubp1Q811S7 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ubp1Q811S7 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Ubp1Q811S7 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ubp1Q811S7 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ubp1Q811S7 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm23990-201ENSMUST00000117031 117 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm12143-201ENSMUST00000119666 332 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm25436-201ENSMUST00000158275 145 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm22840-201ENSMUST00000158444 136 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Mir669k-201ENSMUST00000177742 127 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm25673-201ENSMUST00000179957 127 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm38311-201ENSMUST00000192945 165 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Mir129b-201ENSMUST00000197461 65 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Mir7682-201ENSMUST00000198467 58 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm44099-201ENSMUST00000203299 112 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm45013-201ENSMUST00000206883 178 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm44938-201ENSMUST00000208614 427 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm45796-201ENSMUST00000212483 114 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm3829-201ENSMUST00000222362 619 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm6030-201ENSMUST00000078768 402 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm25589-201ENSMUST00000082502 166 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ubp1Q811S7 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.8□□□□□ -1.8
Ubp1Q811S7 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ubp1Q811S7 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ubp1Q811S7 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ubp1Q811S7 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ubp1Q811S7 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ubp1Q811S7 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ubp1Q811S7 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ubp1Q811S7 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.79□□□□□ -1.8
Ubp1Q811S7 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ubp1Q811S7 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ubp1Q811S7 Gm25765-201ENSMUST00000104100 132 ntBASIC3.79□□□□□ -1.8
Ubp1Q811S7 Gm26476-201ENSMUST00000122618 313 ntBASIC3.79□□□□□ -1.8
Ubp1Q811S7 Gm26020-201ENSMUST00000122729 183 ntBASIC3.79□□□□□ -1.8
Ubp1Q811S7 Gm16327-201ENSMUST00000137146 228 ntBASIC3.79□□□□□ -1.8
Ubp1Q811S7 Gm16533-201ENSMUST00000140035 228 ntBASIC3.79□□□□□ -1.8
Ubp1Q811S7 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.79□□□□□ -1.8
Ubp1Q811S7 Gm25599-201ENSMUST00000157816 103 ntBASIC3.79□□□□□ -1.8
Ubp1Q811S7 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.79□□□□□ -1.8
Ubp1Q811S7 Gm18991-201ENSMUST00000209225 746 ntBASIC3.79□□□□□ -1.8
Ubp1Q811S7 AC192091.2-201ENSMUST00000217869 117 ntBASIC3.79□□□□□ -1.8
Ubp1Q811S7 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.79□□□□□ -1.8
Ubp1Q811S7 Gm22248-201ENSMUST00000082482 150 ntBASIC3.79□□□□□ -1.8
Ubp1Q811S7 Gm26265-201ENSMUST00000083277 135 ntBASIC3.79□□□□□ -1.8
Ubp1Q811S7 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ubp1Q811S7 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ubp1Q811S7 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.79□□□□□ -1.8
Ubp1Q811S7 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.78□□□□□ -1.8
Ubp1Q811S7 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ubp1Q811S7 Gm26135-201ENSMUST00000101993 72 ntBASIC3.78□□□□□ -1.8
Ubp1Q811S7 Gm15377-201ENSMUST00000119594 246 ntBASIC3.78□□□□□ -1.8
Ubp1Q811S7 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.78□□□□□ -1.8
Ubp1Q811S7 Gm16005-201ENSMUST00000120515 269 ntBASIC3.78□□□□□ -1.8
Ubp1Q811S7 Gm13443-201ENSMUST00000120770 555 ntBASIC3.78□□□□□ -1.8
Ubp1Q811S7 Gm11982-201ENSMUST00000121480 314 ntBASIC3.78□□□□□ -1.8
Ubp1Q811S7 Gm17113-201ENSMUST00000170118 171 ntBASIC3.78□□□□□ -1.8
Ubp1Q811S7 Gm6625-201ENSMUST00000177870 272 ntBASIC3.78□□□□□ -1.8
Ubp1Q811S7 Snord50b-201ENSMUST00000178497 72 ntBASIC3.78□□□□□ -1.8
Ubp1Q811S7 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC3.78□□□□□ -1.8
Ubp1Q811S7 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.78□□□□□ -1.8
Ubp1Q811S7 Gm37918-201ENSMUST00000192071 120 ntBASIC3.78□□□□□ -1.8
Ubp1Q811S7 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.78□□□□□ -1.8
Ubp1Q811S7 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.78□□□□□ -1.8
Ubp1Q811S7 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.78□□□□□ -1.8
Ubp1Q811S7 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ubp1Q811S7 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ubp1Q811S7 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.78□□□□□ -1.8
Ubp1Q811S7 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ubp1Q811S7 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ubp1Q811S7 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ubp1Q811S7 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Ubp1Q811S7 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Ubp1Q811S7 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ubp1Q811S7 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.77□□□□□ -1.81
Ubp1Q811S7 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Ubp1Q811S7 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm23271-201ENSMUST00000104052 124 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm24283-201ENSMUST00000104233 107 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm14069-201ENSMUST00000120815 229 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm24440-201ENSMUST00000157236 63 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm25059-201ENSMUST00000157367 117 ntBASIC3.77□□□□□ -1.81
Ubp1Q811S7 Gm24015-201ENSMUST00000157725 232 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 166.5 ms