Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm21815-201ENSMUST00000178213 664 ntBASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm28843-201ENSMUST00000189198 678 ntBASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm29546-201ENSMUST00000191171 678 ntBASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm37568-201ENSMUST00000191755 364 ntBASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm29740-201ENSMUST00000193182 655 ntBASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm45878-201ENSMUST00000211839 241 ntBASIC0.04□□□□□ -2.4
Ush2AQ2QI47 CT030166.2-201ENSMUST00000222021 368 ntBASIC0.04□□□□□ -2.4
Ush2AQ2QI47 AC101945.3-201ENSMUST00000226568 153 ntBASIC0.04□□□□□ -2.4
Ush2AQ2QI47 Gm18551-201ENSMUST00000195594 642 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm5309-201ENSMUST00000197416 677 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC0.03□□□□□ -2.4
Ush2AQ2QI47 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm19599-201ENSMUST00000218898 358 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm25788-201ENSMUST00000082721 131 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm24805-201ENSMUST00000082931 104 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Mir290a-201ENSMUST00000104627 83 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm23713-201ENSMUST00000157353 70 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm22615-201ENSMUST00000158102 70 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm24221-201ENSMUST00000158833 313 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Mir7675-201ENSMUST00000184262 58 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm37720-201ENSMUST00000195497 1241 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm23627-201ENSMUST00000082459 107 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm24614-201ENSMUST00000083269 107 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Traj60-201ENSMUST00000167781 54 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm23523-201ENSMUST00000180190 107 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm36984-201ENSMUST00000192770 235 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm44607-201ENSMUST00000205611 1090 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm34783-201ENSMUST00000209159 303 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm43924-201ENSMUST00000204851 1736 ntBASIC0.03□□□□□ -2.4
Ush2AQ2QI47 Gm13804-201ENSMUST00000119552 172 ntBASIC0.03□□□□□ -2.41
Ush2AQ2QI47 Gm15029-201ENSMUST00000119742 199 ntBASIC0.03□□□□□ -2.41
Ush2AQ2QI47 Gm12639-201ENSMUST00000121400 493 ntBASIC0.03□□□□□ -2.41
Ush2AQ2QI47 Gm22164-201ENSMUST00000158413 106 ntBASIC0.03□□□□□ -2.41
Ush2AQ2QI47 Gm25711-201ENSMUST00000158633 128 ntBASIC0.03□□□□□ -2.41
Ush2AQ2QI47 Gm37029-201ENSMUST00000195773 239 ntBASIC0.03□□□□□ -2.41
Ush2AQ2QI47 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.03□□□□□ -2.41
Ush2AQ2QI47 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC0.03□□□□□ -2.41
Ush2AQ2QI47 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.03□□□□□ -2.41
Ush2AQ2QI47 Gm26074-201ENSMUST00000104063 129 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Snord11-201ENSMUST00000158468 84 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm20794-201ENSMUST00000177626 628 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm21744-201ENSMUST00000178403 662 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm44336-201ENSMUST00000203696 468 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm23102-201ENSMUST00000083724 116 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm14791-201ENSMUST00000119061 1166 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm13440-201ENSMUST00000121665 496 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm36997-201ENSMUST00000195090 707 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm38109-201ENSMUST00000195386 181 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm10360-201ENSMUST00000097219 272 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm24868-201ENSMUST00000157265 136 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm24077-201ENSMUST00000158183 136 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 AC122901.2-201ENSMUST00000216926 285 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 AC159293.2-201ENSMUST00000222289 424 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm25915-201ENSMUST00000104265 126 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm26143-201ENSMUST00000104480 108 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Gm42719-201ENSMUST00000197393 355 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.02□□□□□ -2.41
Ush2AQ2QI47 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 AC155314.1-201ENSMUST00000227624 508 ntBASIC0.02□□□□□ -2.41
Ush2AQ2QI47 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.01□□□□□ -2.41
Ush2AQ2QI47 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.01□□□□□ -2.41
Ush2AQ2QI47 Gm23656-201ENSMUST00000122626 112 ntBASIC0.01□□□□□ -2.41
Ush2AQ2QI47 Gm18357-201ENSMUST00000188184 580 ntBASIC0.01□□□□□ -2.41
Ush2AQ2QI47 Gm29037-201ENSMUST00000189092 313 ntBASIC0.01□□□□□ -2.41
Ush2AQ2QI47 Gm5731-201ENSMUST00000190969 481 ntBASIC0.01□□□□□ -2.41
Ush2AQ2QI47 Gm43402-201ENSMUST00000197159 159 ntBASIC0.01□□□□□ -2.41
Ush2AQ2QI47 Gm44455-201ENSMUST00000200061 82 ntBASIC0.01□□□□□ -2.41
Ush2AQ2QI47 Gm22368-201ENSMUST00000102416 109 ntBASIC0.01□□□□□ -2.41
Ush2AQ2QI47 Gm24887-201ENSMUST00000104386 108 ntBASIC0.01□□□□□ -2.41
Ush2AQ2QI47 Gm9613-201ENSMUST00000171662 196 ntBASIC0.01□□□□□ -2.41
Ush2AQ2QI47 Mir7065-201ENSMUST00000185110 61 ntBASIC0.01□□□□□ -2.41
Ush2AQ2QI47 Gm5329-201ENSMUST00000186898 463 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 158.5 ms