Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 HIVEP1-209ENST00000627968 8924 ntTSL 5 BASIC10.69□□□□□ -0.71e-6■■■□□ 15.6
EXOSC5Q9NQT4 HIVEP1-201ENST00000379388 9027 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.711e-6■■■□□ 15.6
EXOSC5Q9NQT4 HIVEP1-208ENST00000541134 9023 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.711e-6■■■□□ 15.6
EXOSC5Q9NQT4 HIVEP1-205ENST00000484210 1602 ntTSL 1 (best) BASIC8.94□□□□□ -0.981e-6■■■□□ 15.6
EXOSC5Q9NQT4 HIVEP1-206ENST00000487103 585 ntTSL 26.47□□□□□ -1.371e-6■■■□□ 15.6
EXOSC5Q9NQT4 HIVEP1-207ENST00000491710 579 ntTSL 35.74□□□□□ -1.491e-6■■■□□ 15.6
EXOSC5Q9NQT4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.331e-6■■■□□ 15.6
EXOSC5Q9NQT4 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.571e-6■■■□□ 15.6
EXOSC5Q9NQT4 CDCA2-205ENST00000523454 922 ntTSL 53.41□□□□□ -1.861e-6■■■□□ 15.6
EXOSC5Q9NQT4 TRA2B-211ENST00000477939 530 ntTSL 25.4□□□□□ -1.545e-8■■■□□ 15.5
EXOSC5Q9NQT4 TRA2B-215ENST00000492417 4141 ntTSL 1 (best)3.87□□□□□ -1.795e-8■■■□□ 15.5
EXOSC5Q9NQT4 TRA2B-210ENST00000471134 724 ntTSL 53.82□□□□□ -1.85e-8■■■□□ 15.5
EXOSC5Q9NQT4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.965e-6■■■□□ 15.5
EXOSC5Q9NQT4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.28■□□□□ 0.525e-6■■■□□ 15.5
EXOSC5Q9NQT4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.135e-6■■■□□ 15.5
EXOSC5Q9NQT4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.36□□□□□ -0.115e-6■■■□□ 15.5
EXOSC5Q9NQT4 CSNK1D-212ENST00000580061 578 ntTSL 313.17□□□□□ -0.31e-6■■■□□ 15.5
EXOSC5Q9NQT4 ACSM3-203ENST00000501740 839 ntTSL 511.18□□□□□ -0.622e-8■■■□□ 15.5
EXOSC5Q9NQT4 ACSM3-213ENST00000568235 558 ntTSL 49.64□□□□□ -0.872e-8■■■□□ 15.5
EXOSC5Q9NQT4 ACSM3-205ENST00000561584 561 ntTSL 49.4□□□□□ -0.92e-8■■■□□ 15.5
EXOSC5Q9NQT4 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.995e-6■■■□□ 15.5
EXOSC5Q9NQT4 AC004381.2-201ENST00000637768 1329 ntBASIC8.13□□□□□ -1.112e-8■■■□□ 15.5
EXOSC5Q9NQT4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.11e-6■■■□□ 15.5
EXOSC5Q9NQT4 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.631e-6■■■□□ 15.5
EXOSC5Q9NQT4 RNF217-206ENST00000454842 545 ntTSL 44.44□□□□□ -1.71e-6■■■□□ 15.5
EXOSC5Q9NQT4 RNF217-207ENST00000519565 10660 ntTSL 53.84□□□□□ -1.791e-6■■■□□ 15.5
EXOSC5Q9NQT4 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.637e-7■■■□□ 15.4
EXOSC5Q9NQT4 KRIT1-205ENST00000412043 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.747e-7■■■□□ 15.4
EXOSC5Q9NQT4 KRIT1-202ENST00000394503 2827 ntTSL 2 BASIC8.27□□□□□ -1.097e-7■■■□□ 15.4
EXOSC5Q9NQT4 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.157e-7■■■□□ 15.4
EXOSC5Q9NQT4 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.227e-7■■■□□ 15.4
EXOSC5Q9NQT4 KRIT1-221ENST00000475770 2411 ntTSL 1 (best)7.28□□□□□ -1.247e-7■■■□□ 15.4
EXOSC5Q9NQT4 KRIT1-222ENST00000486261 4057 ntTSL 1 (best)4.54□□□□□ -1.687e-7■■■□□ 15.4
EXOSC5Q9NQT4 AP001931.1-201ENST00000531074 580 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.855e-7■■■□□ 15.4
EXOSC5Q9NQT4 TMX2-CTNND1-201ENST00000528395 585 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.975e-7■■■□□ 15.4
EXOSC5Q9NQT4 CTNND1-209ENST00000524579 505 ntTSL 44.07□□□□□ -1.765e-7■■■□□ 15.4
EXOSC5Q9NQT4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.053e-7■■■□□ 15.4
EXOSC5Q9NQT4 UBAC1-204ENST00000478485 773 ntTSL 219.15■□□□□ 0.663e-7■■■□□ 15.4
EXOSC5Q9NQT4 EIF3B-203ENST00000413917 962 ntTSL 216.05■□□□□ 0.163e-7■■■□□ 15.4
EXOSC5Q9NQT4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.5□□□□□ -0.093e-7■■■□□ 15.4
EXOSC5Q9NQT4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.153e-7■■■□□ 15.4
EXOSC5Q9NQT4 DDOST-205ENST00000477229 766 ntTSL 214.09□□□□□ -0.153e-7■■■□□ 15.4
EXOSC5Q9NQT4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.77□□□□□ -0.213e-7■■■□□ 15.4
EXOSC5Q9NQT4 EIF3B-204ENST00000431643 1074 ntTSL 513.22□□□□□ -0.293e-7■■■□□ 15.4
EXOSC5Q9NQT4 DDOST-203ENST00000464364 502 ntTSL 511.36□□□□□ -0.593e-7■■■□□ 15.4
EXOSC5Q9NQT4 GSTCD-204ENST00000484843 2228 ntTSL 213.54□□□□□ -0.243e-7■■■□□ 15.4
EXOSC5Q9NQT4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.83□□□□□ -0.363e-7■■■□□ 15.4
EXOSC5Q9NQT4 GSTCD-210ENST00000515255 1373 ntTSL 211.24□□□□□ -0.613e-7■■■□□ 15.4
EXOSC5Q9NQT4 GSTCD-203ENST00000394730 4043 ntTSL 1 (best) BASIC9.63□□□□□ -0.873e-7■■■□□ 15.4
EXOSC5Q9NQT4 GSTCD-211ENST00000515279 4273 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -13e-7■■■□□ 15.4
EXOSC5Q9NQT4 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.193e-7■■■□□ 15.4
EXOSC5Q9NQT4 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.423e-7■■■□□ 15.4
EXOSC5Q9NQT4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.563e-7■■■□□ 15.4
EXOSC5Q9NQT4 FBXW7-205ENST00000603548 2562 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.093e-7■■■□□ 15.4
EXOSC5Q9NQT4 FBXW7-212ENST00000604872 970 ntTSL 1 (best) BASIC7.84□□□□□ -1.153e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.57■■□□□ 1.047e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.96■□□□□ 0.797e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.697e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.35■□□□□ 0.697e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-215ENST00000450019 1689 ntTSL 519.14■□□□□ 0.657e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.8■□□□□ 0.67e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.1■□□□□ 0.497e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.1■□□□□ 0.497e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.51■□□□□ 0.397e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-208ENST00000430807 733 ntTSL 317.42■□□□□ 0.387e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-206ENST00000411907 568 ntTSL 417.34■□□□□ 0.377e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-211ENST00000434168 862 ntTSL 314.82□□□□□ -0.047e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-216ENST00000450664 570 ntTSL 414.46□□□□□ -0.097e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-203ENST00000399807 2241 ntTSL 513.53□□□□□ -0.247e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-226ENST00000490583 888 ntTSL 313.38□□□□□ -0.277e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-218ENST00000462579 649 ntTSL 413.12□□□□□ -0.317e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.39□□□□□ -0.437e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-213ENST00000444651 847 ntTSL 311.18□□□□□ -0.627e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-224ENST00000485715 617 ntTSL 510.34□□□□□ -0.757e-7■■■□□ 15.4
EXOSC5Q9NQT4 TANGO2-225ENST00000490121 125 ntTSL 38.74□□□□□ -1.017e-7■■■□□ 15.4
EXOSC5Q9NQT4 PICALM-212ENST00000529760 1153 ntTSL 55.08□□□□□ -1.65e-7■■■□□ 15.3
EXOSC5Q9NQT4 PICALM-214ENST00000530692 963 ntTSL 54.62□□□□□ -1.675e-7■■■□□ 15.3
EXOSC5Q9NQT4 PICALM-207ENST00000526961 802 ntTSL 54.58□□□□□ -1.685e-7■■■□□ 15.3
EXOSC5Q9NQT4 PICALM-211ENST00000529016 757 ntTSL 34.15□□□□□ -1.755e-7■■■□□ 15.3
EXOSC5Q9NQT4 PICALM-205ENST00000526548 738 ntTSL 1 (best)3.67□□□□□ -1.825e-7■■■□□ 15.3
EXOSC5Q9NQT4 PICALM-220ENST00000532603 566 ntTSL 43.66□□□□□ -1.825e-7■■■□□ 15.3
EXOSC5Q9NQT4 DYRK1A-209ENST00000608928 483 ntTSL 516.66■□□□□ 0.268e-8■■■□□ 15.3
EXOSC5Q9NQT4 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.546e-7■■■□□ 15.3
EXOSC5Q9NQT4 MALSU1-201ENST00000287543 572 ntTSL 214.89□□□□□ -0.032e-6■■■□□ 15.2
EXOSC5Q9NQT4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.272e-6■■■□□ 15.2
EXOSC5Q9NQT4 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.74e-6■■■□□ 15.2
EXOSC5Q9NQT4 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.854e-6■■■□□ 15.2
EXOSC5Q9NQT4 VCL-206ENST00000623461 7995 ntTSL 1 (best)8.27□□□□□ -1.094e-6■■■□□ 15.2
EXOSC5Q9NQT4 VCL-207ENST00000624354 3307 ntTSL 27.63□□□□□ -1.194e-6■■■□□ 15.2
EXOSC5Q9NQT4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.91■□□□□ 0.467e-7■■■□□ 15.2
EXOSC5Q9NQT4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.217e-7■■■□□ 15.2
EXOSC5Q9NQT4 BCR-212ENST00000479188 658 ntTSL 411.16□□□□□ -0.627e-7■■■□□ 15.2
EXOSC5Q9NQT4 HERC2-205ENST00000564383 471 ntTSL 35.79□□□□□ -1.482e-6■■■□□ 15.1
EXOSC5Q9NQT4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.13■□□□□ 0.015e-7■■■□□ 15.1
EXOSC5Q9NQT4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 05e-7■■■□□ 15.1
EXOSC5Q9NQT4 MAP4K3-203ENST00000414968 558 ntTSL 42.76□□□□□ -1.975e-7■■■□□ 15.1
EXOSC5Q9NQT4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.5□□□□□ -2.015e-7■■■□□ 15.1
EXOSC5Q9NQT4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.09■□□□□ 0.012e-7■■■□□ 15.1
EXOSC5Q9NQT4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.87■□□□□ 0.291e-6■■■□□ 15.1
EXOSC5Q9NQT4 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.261e-6■■■□□ 15
Retrieved 100 of 8,799 protein–RNA pairs in 229.9 ms