Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 NOP56-209ENST00000469588 950 ntTSL 218.67■□□□□ 0.581e-8■□□□□ 8.3
DDX59Q5T1V6 MTSS1L-202ENST00000562883 407 ntTSL 216.15■□□□□ 0.181e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-204ENST00000525994 390 ntTSL 414.12□□□□□ -0.151e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-214ENST00000534613 737 ntTSL 513.79□□□□□ -0.21e-8■□□□□ 8.3
DDX59Q5T1V6 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.271e-8■□□□□ 8.3
DDX59Q5T1V6 NOP56-218ENST00000496775 729 ntTSL 212.06□□□□□ -0.481e-8■□□□□ 8.3
DDX59Q5T1V6 NOP56-203ENST00000445139 856 ntTSL 511.85□□□□□ -0.511e-8■□□□□ 8.3
DDX59Q5T1V6 NOP56-217ENST00000494697 919 ntTSL 511.8□□□□□ -0.521e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-207ENST00000526732 824 ntTSL 211.51□□□□□ -0.571e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-216ENST00000540933 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.611e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-215ENST00000534779 2626 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.611e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-213ENST00000534422 702 ntTSL 510.41□□□□□ -0.741e-8■□□□□ 8.3
DDX59Q5T1V6 NOP56-204ENST00000460258 837 ntTSL 410.4□□□□□ -0.741e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.841e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-211ENST00000532402 3718 ntTSL 1 (best)9.59□□□□□ -0.871e-8■□□□□ 8.3
DDX59Q5T1V6 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.921e-8■□□□□ 8.3
DDX59Q5T1V6 FBRS-206ENST00000494101 2782 ntTSL 213.85□□□□□ -0.194e-6■□□□□ 8.3
DDX59Q5T1V6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.1■■□□□ 1.452e-10■□□□□ 8.3
DDX59Q5T1V6 PROC-204ENST00000419985 500 ntTSL 419.85■□□□□ 0.772e-10■□□□□ 8.3
DDX59Q5T1V6 PROC-208ENST00000442644 600 ntTSL 317.77■□□□□ 0.442e-10■□□□□ 8.3
DDX59Q5T1V6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.242e-10■□□□□ 8.3
DDX59Q5T1V6 PROC-206ENST00000429925 581 ntTSL 313.18□□□□□ -0.32e-10■□□□□ 8.3
DDX59Q5T1V6 PROC-207ENST00000431364 566 ntTSL 411.37□□□□□ -0.592e-10■□□□□ 8.3
DDX59Q5T1V6 PROC-205ENST00000427769 598 ntTSL 411.05□□□□□ -0.642e-10■□□□□ 8.3
DDX59Q5T1V6 PROC-210ENST00000474030 501 ntTSL 410.07□□□□□ -0.82e-10■□□□□ 8.3
DDX59Q5T1V6 TNFRSF10B-208ENST00000523752 3328 ntTSL 1 (best)7.73□□□□□ -1.171e-8■□□□□ 8.3
DDX59Q5T1V6 RBCK1-212ENST00000468272 1486 ntTSL 519.54■□□□□ 0.723e-17■□□□□ 8.3
DDX59Q5T1V6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.06■□□□□ 0.89e-9■□□□□ 8.2
DDX59Q5T1V6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.69e-9■□□□□ 8.2
DDX59Q5T1V6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.251e-9■□□□□ 8.2
DDX59Q5T1V6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.5■□□□□ 0.552e-10■□□□□ 8.2
DDX59Q5T1V6 ARF3-204ENST00000485410 563 ntTSL 317.37■□□□□ 0.372e-10■□□□□ 8.2
DDX59Q5T1V6 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.422e-10■□□□□ 8.2
DDX59Q5T1V6 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.52e-10■□□□□ 8.2
DDX59Q5T1V6 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.032e-10■□□□□ 8.2
DDX59Q5T1V6 SORBS3-206ENST00000519127 209 ntTSL 216.65■□□□□ 0.265e-8■□□□□ 8.2
DDX59Q5T1V6 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.237e-6■□□□□ 8.2
DDX59Q5T1V6 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.52□□□□□ -0.257e-6■□□□□ 8.2
DDX59Q5T1V6 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.94□□□□□ -0.347e-6■□□□□ 8.2
DDX59Q5T1V6 CX3CL1-201ENST00000006053 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.787e-6■□□□□ 8.2
DDX59Q5T1V6 CX3CL1-202ENST00000563383 3313 ntTSL 5 BASIC10.1□□□□□ -0.797e-6■□□□□ 8.2
DDX59Q5T1V6 UBE2Z-206ENST00000511373 769 ntTSL 24.58□□□□□ -1.687e-6■□□□□ 8.2
DDX59Q5T1V6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.213e-25■□□□□ 8.2
DDX59Q5T1V6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.293e-25■□□□□ 8.2
DDX59Q5T1V6 KHSRP-205ENST00000595223 956 ntTSL 515.74■□□□□ 0.113e-25■□□□□ 8.2
DDX59Q5T1V6 KHSRP-203ENST00000594745 379 ntTSL 312.71□□□□□ -0.373e-25■□□□□ 8.2
DDX59Q5T1V6 KHSRP-208ENST00000597656 328 ntTSL 57.67□□□□□ -1.183e-25■□□□□ 8.2
DDX59Q5T1V6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.74■■□□□ 1.714e-6■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-208ENST00000455580 721 ntTSL 321.55■■□□□ 1.044e-6■□□□□ 8.1
DDX59Q5T1V6 RGL2-244ENST00000485077 1020 ntTSL 219.85■□□□□ 0.772e-11■□□□□ 8.1
DDX59Q5T1V6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.624e-6■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-205ENST00000420282 570 ntTSL 418.66■□□□□ 0.584e-6■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-206ENST00000427786 569 ntTSL 417.64■□□□□ 0.414e-6■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.154e-6■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.144e-6■□□□□ 8.1
DDX59Q5T1V6 RGL2-239ENST00000460988 754 ntTSL 313.72□□□□□ -0.212e-11■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-207ENST00000441461 584 ntTSL 213.55□□□□□ -0.244e-6■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-209ENST00000464273 577 ntTSL 213.23□□□□□ -0.294e-6■□□□□ 8.1
DDX59Q5T1V6 STAG3L3-202ENST00000428423 2137 ntTSL 312.95□□□□□ -0.344e-6■□□□□ 8.1
DDX59Q5T1V6 IGF2BP2-205ENST00000461957 509 ntTSL 512.67□□□□□ -0.384e-6■□□□□ 8.1
DDX59Q5T1V6 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.44e-6■□□□□ 8.1
DDX59Q5T1V6 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC11.99□□□□□ -0.494e-6■□□□□ 8.1
DDX59Q5T1V6 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC11.93□□□□□ -0.54e-6■□□□□ 8.1
DDX59Q5T1V6 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC11.52□□□□□ -0.574e-6■□□□□ 8.1
DDX59Q5T1V6 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.784e-6■□□□□ 8.1
DDX59Q5T1V6 ACAA1-210ENST00000451419 964 ntTSL 39.29□□□□□ -0.924e-6■□□□□ 8.1
DDX59Q5T1V6 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.054e-6■□□□□ 8.1
DDX59Q5T1V6 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.08□□□□□ -1.124e-6■□□□□ 8.1
DDX59Q5T1V6 IGF2BP2-209ENST00000493302 358 ntTSL 56.8□□□□□ -1.324e-6■□□□□ 8.1
DDX59Q5T1V6 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.132e-12■□□□□ 8.1
DDX59Q5T1V6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.22□□□□□ -0.132e-12■□□□□ 8.1
DDX59Q5T1V6 PRMT7-224ENST00000568463 1848 ntTSL 213.8□□□□□ -0.22e-12■□□□□ 8.1
DDX59Q5T1V6 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.312e-12■□□□□ 8.1
DDX59Q5T1V6 PRMT7-211ENST00000563608 626 ntTSL 512.84□□□□□ -0.352e-12■□□□□ 8.1
DDX59Q5T1V6 PRMT7-223ENST00000567542 3542 ntTSL 1 (best)12.61□□□□□ -0.392e-12■□□□□ 8.1
DDX59Q5T1V6 PRMT7-225ENST00000568975 2996 ntTSL 210.99□□□□□ -0.652e-12■□□□□ 8.1
DDX59Q5T1V6 NOTUM-203ENST00000477214 813 ntTSL 521.26■□□□□ 0.994e-7■□□□□ 8
DDX59Q5T1V6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.124e-7■□□□□ 8
DDX59Q5T1V6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.064e-7■□□□□ 8
DDX59Q5T1V6 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.63□□□□□ -0.234e-7■□□□□ 8
DDX59Q5T1V6 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.264e-7■□□□□ 8
DDX59Q5T1V6 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.314e-7■□□□□ 8
DDX59Q5T1V6 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.1□□□□□ -0.314e-7■□□□□ 8
DDX59Q5T1V6 NCOR2-220ENST00000493859 557 ntTSL 311.64□□□□□ -0.554e-7■□□□□ 8
DDX59Q5T1V6 NCOR2-222ENST00000536195 452 ntTSL 310.7□□□□□ -0.74e-7■□□□□ 8
DDX59Q5T1V6 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC11.18□□□□□ -0.622e-50■□□□□ 8
DDX59Q5T1V6 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.243e-12■□□□□ 8
DDX59Q5T1V6 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.63e-12■□□□□ 8
DDX59Q5T1V6 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.57□□□□□ -1.683e-12■□□□□ 8
Retrieved 89 of 7,289 protein–RNA pairs in 250.1 ms