Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Pfdn6Q03958 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Gm13168-201ENSMUST00000121771 632 ntBASIC17.13■□□□□ 0.33
Pfdn6Q03958 Gm10653-202ENSMUST00000139570 835 ntBASIC17.13■□□□□ 0.33
Pfdn6Q03958 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.13■□□□□ 0.33
Pfdn6Q03958 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn6Q03958 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pfdn6Q03958 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.12■□□□□ 0.33
Pfdn6Q03958 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn6Q03958 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.12■□□□□ 0.33
Pfdn6Q03958 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pfdn6Q03958 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pfdn6Q03958 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pfdn6Q03958 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pfdn6Q03958 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pfdn6Q03958 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pfdn6Q03958 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pfdn6Q03958 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pfdn6Q03958 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pfdn6Q03958 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Pfdn6Q03958 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pfdn6Q03958 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.11■□□□□ 0.33
Pfdn6Q03958 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.11■□□□□ 0.33
Pfdn6Q03958 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.11■□□□□ 0.33
Pfdn6Q03958 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pfdn6Q03958 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pfdn6Q03958 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pfdn6Q03958 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pfdn6Q03958 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pfdn6Q03958 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pfdn6Q03958 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.1■□□□□ 0.33
Pfdn6Q03958 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.1■□□□□ 0.33
Pfdn6Q03958 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pfdn6Q03958 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pfdn6Q03958 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.1■□□□□ 0.33
Pfdn6Q03958 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn6Q03958 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pfdn6Q03958 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn6Q03958 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn6Q03958 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pfdn6Q03958 Gm24841-201ENSMUST00000158676 357 ntBASIC17.09■□□□□ 0.33
Pfdn6Q03958 Gm10698-201ENSMUST00000182663 604 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms