Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
Trim3Q9R1R2 Gm25094-201ENSMUST00000103992 131 ntBASIC2□□□□□ -2.09
Trim3Q9R1R2 Gm12550-201ENSMUST00000118478 329 ntBASIC2□□□□□ -2.09
Trim3Q9R1R2 Gm12934-201ENSMUST00000119221 343 ntBASIC2□□□□□ -2.09
Trim3Q9R1R2 Gm13153-201ENSMUST00000120969 637 ntBASIC2□□□□□ -2.09
Trim3Q9R1R2 Gm26278-201ENSMUST00000157098 132 ntBASIC2□□□□□ -2.09
Trim3Q9R1R2 Gm23469-201ENSMUST00000157131 104 ntBASIC2□□□□□ -2.09
Trim3Q9R1R2 Gm23641-201ENSMUST00000157857 101 ntBASIC2□□□□□ -2.09
Trim3Q9R1R2 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC2□□□□□ -2.09
Trim3Q9R1R2 Cfap61-214ENSMUST00000167179 183 ntBASIC2□□□□□ -2.09
Trim3Q9R1R2 Gm18588-201ENSMUST00000177308 492 ntBASIC2□□□□□ -2.09
Trim3Q9R1R2 Gm27236-201ENSMUST00000184147 442 ntBASIC2□□□□□ -2.09
Trim3Q9R1R2 Gm28489-201ENSMUST00000186655 316 ntBASIC2□□□□□ -2.09
Trim3Q9R1R2 Gm43083-201ENSMUST00000199594 476 ntBASIC2□□□□□ -2.09
Trim3Q9R1R2 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2□□□□□ -2.09
Trim3Q9R1R2 AC167192.2-201ENSMUST00000224794 198 ntBASIC2□□□□□ -2.09
Trim3Q9R1R2 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trim3Q9R1R2 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trim3Q9R1R2 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm15443-201ENSMUST00000118947 820 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm11522-201ENSMUST00000120533 176 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24596-201ENSMUST00000122504 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm26102-201ENSMUST00000157251 284 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm23332-201ENSMUST00000157424 275 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm27396-201ENSMUST00000157708 58 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24584-201ENSMUST00000157972 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24191-201ENSMUST00000157977 122 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm23411-201ENSMUST00000157988 62 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm22535-201ENSMUST00000158174 119 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm25211-201ENSMUST00000177553 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24540-201ENSMUST00000177627 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm25256-201ENSMUST00000177746 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm22822-201ENSMUST00000177941 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Rnu6-201ENSMUST00000178023 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm23151-201ENSMUST00000178061 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm25245-201ENSMUST00000178139 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24753-201ENSMUST00000178183 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm25829-201ENSMUST00000178275 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm22092-201ENSMUST00000178290 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24486-201ENSMUST00000178420 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm23217-201ENSMUST00000178482 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm26245-201ENSMUST00000178491 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm23610-201ENSMUST00000178659 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm23092-201ENSMUST00000178688 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm25709-201ENSMUST00000178844 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm25547-201ENSMUST00000178877 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm25312-201ENSMUST00000178972 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24722-201ENSMUST00000179017 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm22969-201ENSMUST00000179018 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm25101-201ENSMUST00000179057 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm26378-201ENSMUST00000179093 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24873-201ENSMUST00000179101 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm23934-201ENSMUST00000179111 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm22623-201ENSMUST00000179244 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm25737-201ENSMUST00000179274 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm22618-201ENSMUST00000179376 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24182-201ENSMUST00000179419 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24242-201ENSMUST00000179440 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24863-201ENSMUST00000179499 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm25064-201ENSMUST00000179535 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm26295-201ENSMUST00000179690 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm23712-201ENSMUST00000179713 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm22823-201ENSMUST00000179754 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm22360-201ENSMUST00000179775 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24978-201ENSMUST00000179782 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24967-201ENSMUST00000179791 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm25173-201ENSMUST00000179794 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24870-201ENSMUST00000179897 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm22288-201ENSMUST00000179904 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm22645-201ENSMUST00000180010 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24565-201ENSMUST00000180099 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm23805-201ENSMUST00000180129 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm23512-201ENSMUST00000180237 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm25327-201ENSMUST00000180263 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm26058-201ENSMUST00000180294 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm22418-201ENSMUST00000180326 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm27991-201ENSMUST00000184804 137 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Mir3068-202ENSMUST00000197755 79 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.99□□□□□ -2.09
Trim3Q9R1R2 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC1.99□□□□□ -2.09
Trim3Q9R1R2 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm9318-201ENSMUST00000222444 438 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm23629-201ENSMUST00000082465 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm23924-201ENSMUST00000082474 108 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm22246-201ENSMUST00000082478 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm22749-201ENSMUST00000082490 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm22747-201ENSMUST00000082495 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm22063-201ENSMUST00000082560 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm23057-201ENSMUST00000082801 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm26328-201ENSMUST00000082821 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm26331-201ENSMUST00000082824 107 ntBASIC1.99□□□□□ -2.09
Trim3Q9R1R2 Gm24205-201ENSMUST00000082953 107 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 187.1 ms