Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.5□□□□□ -1.85
Brf1Q8CFK2 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Gm23625-201ENSMUST00000082457 100 ntBASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Gm25856-201ENSMUST00000082786 75 ntBASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Mir693-201ENSMUST00000102187 89 ntBASIC3.49□□□□□ -1.85
Brf1Q8CFK2 Gm24982-201ENSMUST00000104456 132 ntBASIC3.49□□□□□ -1.85
Brf1Q8CFK2 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.49□□□□□ -1.85
Brf1Q8CFK2 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.49□□□□□ -1.85
Brf1Q8CFK2 Gm22839-201ENSMUST00000158436 304 ntBASIC3.49□□□□□ -1.85
Brf1Q8CFK2 Gm23380-201ENSMUST00000158448 103 ntBASIC3.49□□□□□ -1.85
Brf1Q8CFK2 Gm36946-201ENSMUST00000192706 435 ntBASIC3.49□□□□□ -1.85
Brf1Q8CFK2 Gm37586-201ENSMUST00000193654 204 ntBASIC3.49□□□□□ -1.85
Brf1Q8CFK2 Gm37007-201ENSMUST00000194234 319 ntBASIC3.49□□□□□ -1.85
Brf1Q8CFK2 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.49□□□□□ -1.85
Brf1Q8CFK2 Gm22620-201ENSMUST00000082700 133 ntBASIC3.49□□□□□ -1.85
Brf1Q8CFK2 Gm10212-201ENSMUST00000087884 324 ntBASIC3.49□□□□□ -1.85
Brf1Q8CFK2 Gm10222-201ENSMUST00000088336 294 ntBASIC3.49□□□□□ -1.85
Brf1Q8CFK2 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.49□□□□□ -1.85
Brf1Q8CFK2 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Mir467g-201ENSMUST00000116906 120 ntBASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Gm23232-201ENSMUST00000157300 105 ntBASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Gm22814-201ENSMUST00000157452 104 ntBASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Gm23141-201ENSMUST00000178682 94 ntBASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Gm23370-202ENSMUST00000197008 129 ntBASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Gm35931-201ENSMUST00000203931 448 ntBASIC3.48□□□□□ -1.85
Brf1Q8CFK2 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Gm22970-201ENSMUST00000083304 186 ntBASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Brf1Q8CFK2 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Brf1Q8CFK2 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.47□□□□□ -1.85
Brf1Q8CFK2 Gm17166-201ENSMUST00000172006 431 ntBASIC3.47□□□□□ -1.85
Brf1Q8CFK2 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.47□□□□□ -1.85
Brf1Q8CFK2 Gm26426-201ENSMUST00000177866 123 ntBASIC3.47□□□□□ -1.85
Brf1Q8CFK2 Gm26060-201ENSMUST00000180094 123 ntBASIC3.47□□□□□ -1.85
Brf1Q8CFK2 Gm24350-202ENSMUST00000198309 132 ntBASIC3.47□□□□□ -1.85
Brf1Q8CFK2 Gm44266-201ENSMUST00000205235 500 ntBASIC3.47□□□□□ -1.85
Brf1Q8CFK2 Gm45296-201ENSMUST00000209625 205 ntBASIC3.47□□□□□ -1.85
Brf1Q8CFK2 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.47□□□□□ -1.85
Brf1Q8CFK2 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.47□□□□□ -1.85
Brf1Q8CFK2 Gm25896-201ENSMUST00000083713 136 ntBASIC3.47□□□□□ -1.85
Brf1Q8CFK2 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
Brf1Q8CFK2 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Gm24282-201ENSMUST00000104232 66 ntBASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Gm13967-201ENSMUST00000120404 380 ntBASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Gm25643-201ENSMUST00000158874 103 ntBASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Gm24084-201ENSMUST00000175173 137 ntBASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Gm27921-201ENSMUST00000183968 108 ntBASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Gm43600-201ENSMUST00000202134 223 ntBASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Gm18000-201ENSMUST00000212153 800 ntBASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Gm23615-201ENSMUST00000082602 65 ntBASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Rny1-201ENSMUST00000083767 112 ntBASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Brf1Q8CFK2 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Gm23911-201ENSMUST00000104596 134 ntBASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Gm15526-201ENSMUST00000112504 204 ntBASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Gm13880-201ENSMUST00000118421 474 ntBASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Gm24630-201ENSMUST00000122768 106 ntBASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Gm43250-201ENSMUST00000196536 273 ntBASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Mir7661-201ENSMUST00000197023 61 ntBASIC3.45□□□□□ -1.86
Brf1Q8CFK2 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Gm44010-201ENSMUST00000204432 331 ntBASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Gm45365-201ENSMUST00000209489 256 ntBASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.45□□□□□ -1.86
Brf1Q8CFK2 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.45□□□□□ -1.86
Brf1Q8CFK2 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.45□□□□□ -1.86
Brf1Q8CFK2 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Gm22685-201ENSMUST00000082848 106 ntBASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Brf1Q8CFK2 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Mir875-201ENSMUST00000104698 78 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Gm14448-201ENSMUST00000116383 210 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Gm11794-201ENSMUST00000119446 237 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Gm14792-201ENSMUST00000119725 258 ntBASIC3.44□□□□□ -1.86
Brf1Q8CFK2 Gm12412-201ENSMUST00000121867 328 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 150.1 ms