Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.05□□□□□ -2.08
Trim3Q9R1R2 Gm6109-201ENSMUST00000223297 348 ntBASIC2.05□□□□□ -2.08
Trim3Q9R1R2 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.05□□□□□ -2.08
Trim3Q9R1R2 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.05□□□□□ -2.08
Trim3Q9R1R2 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trim3Q9R1R2 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trim3Q9R1R2 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trim3Q9R1R2 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trim3Q9R1R2 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.05□□□□□ -2.08
Trim3Q9R1R2 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Gm24907-201ENSMUST00000116932 128 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Gm14390-201ENSMUST00000117505 1695 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Gm21729-201ENSMUST00000180058 664 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Gm21853-201ENSMUST00000180071 664 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Gm27539-201ENSMUST00000184971 224 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Gm29495-201ENSMUST00000189319 664 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Gm43708-201ENSMUST00000198857 961 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Gm43587-201ENSMUST00000199590 204 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Mir691-201ENSMUST00000199719 78 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Gm44336-201ENSMUST00000203696 468 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Gm43865-201ENSMUST00000204721 127 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Gm7039-201ENSMUST00000205138 346 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Gm7065-201ENSMUST00000222150 474 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Gm22620-201ENSMUST00000082700 133 ntBASIC2.04□□□□□ -2.08
Trim3Q9R1R2 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trim3Q9R1R2 Gm13378-201ENSMUST00000117483 336 ntBASIC2.03□□□□□ -2.08
Trim3Q9R1R2 Gm11363-201ENSMUST00000121672 548 ntBASIC2.03□□□□□ -2.08
Trim3Q9R1R2 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.03□□□□□ -2.08
Trim3Q9R1R2 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.03□□□□□ -2.08
Trim3Q9R1R2 Gm24551-201ENSMUST00000158645 92 ntBASIC2.03□□□□□ -2.08
Trim3Q9R1R2 Gm26335-201ENSMUST00000178449 107 ntBASIC2.03□□□□□ -2.08
Trim3Q9R1R2 Gm29231-201ENSMUST00000179850 319 ntBASIC2.03□□□□□ -2.08
Trim3Q9R1R2 Gm5001-201ENSMUST00000204361 331 ntBASIC2.03□□□□□ -2.08
Trim3Q9R1R2 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.03□□□□□ -2.08
Trim3Q9R1R2 AC147101.1-201ENSMUST00000217964 312 ntBASIC2.03□□□□□ -2.08
Trim3Q9R1R2 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.03□□□□□ -2.08
Trim3Q9R1R2 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.03□□□□□ -2.08
Trim3Q9R1R2 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trim3Q9R1R2 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trim3Q9R1R2 Gm25130-201ENSMUST00000082650 156 ntBASIC2.03□□□□□ -2.08
Trim3Q9R1R2 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trim3Q9R1R2 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trim3Q9R1R2 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm15211-201ENSMUST00000118932 528 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm12956-201ENSMUST00000122184 414 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm22199-201ENSMUST00000122660 126 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm14364-201ENSMUST00000129209 267 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm24862-201ENSMUST00000179103 79 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm23310-201ENSMUST00000179105 79 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm25461-201ENSMUST00000179293 79 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm37361-201ENSMUST00000194345 132 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm9227-201ENSMUST00000194733 566 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm33354-201ENSMUST00000195448 906 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm37119-201ENSMUST00000195691 389 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm43510-201ENSMUST00000197922 353 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm44844-201ENSMUST00000207242 336 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm18696-201ENSMUST00000220103 274 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm7214-201ENSMUST00000222428 272 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm23515-201ENSMUST00000082829 107 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trim3Q9R1R2 AC163660.3-201ENSMUST00000224253 1563 ntBASIC2.02□□□□□ -2.09
Trim3Q9R1R2 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Gm22834-201ENSMUST00000102021 79 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Mir344e-201ENSMUST00000104677 66 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Gm23551-201ENSMUST00000116852 121 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Gm12871-201ENSMUST00000118758 438 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Gm14392-201ENSMUST00000120332 401 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Gm14413-201ENSMUST00000122158 408 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Gm15692-201ENSMUST00000152173 352 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Gm23829-201ENSMUST00000157392 270 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Gm22527-201ENSMUST00000158816 106 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Mir6376-201ENSMUST00000185149 131 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Gm18971-201ENSMUST00000197240 374 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Gm3724-201ENSMUST00000197957 349 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Gm44083-201ENSMUST00000203114 337 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Trim3Q9R1R2 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.01□□□□□ -2.09
Trim3Q9R1R2 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 170.7 ms