Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Brf1Q8CFK2 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.55□□□□□ -1.84
Brf1Q8CFK2 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.54□□□□□ -1.84
Brf1Q8CFK2 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Brf1Q8CFK2 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Brf1Q8CFK2 Mir291a-201ENSMUST00000104815 82 ntBASIC3.54□□□□□ -1.84
Brf1Q8CFK2 Gm12782-201ENSMUST00000117519 727 ntBASIC3.54□□□□□ -1.84
Brf1Q8CFK2 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Brf1Q8CFK2 Gm5967-201ENSMUST00000172723 494 ntBASIC3.54□□□□□ -1.84
Brf1Q8CFK2 Gm24487-201ENSMUST00000178017 63 ntBASIC3.54□□□□□ -1.84
Brf1Q8CFK2 Gm27796-201ENSMUST00000183863 261 ntBASIC3.54□□□□□ -1.84
Brf1Q8CFK2 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.54□□□□□ -1.84
Brf1Q8CFK2 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.54□□□□□ -1.84
Brf1Q8CFK2 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.54□□□□□ -1.84
Brf1Q8CFK2 AC163033.1-201ENSMUST00000218608 157 ntBASIC3.54□□□□□ -1.84
Brf1Q8CFK2 Mir208a-201ENSMUST00000083498 83 ntBASIC3.54□□□□□ -1.84
Brf1Q8CFK2 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Brf1Q8CFK2 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Brf1Q8CFK2 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Brf1Q8CFK2 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm15896-201ENSMUST00000118045 440 ntBASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm11936-201ENSMUST00000118323 160 ntBASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm14877-201ENSMUST00000119803 478 ntBASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm24787-201ENSMUST00000157380 123 ntBASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm23325-201ENSMUST00000157422 129 ntBASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm23586-201ENSMUST00000157657 123 ntBASIC3.53□□□□□ -1.84
Brf1Q8CFK2 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm17100-201ENSMUST00000168963 272 ntBASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm6660-201ENSMUST00000179149 468 ntBASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm20257-202ENSMUST00000188643 130 ntBASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm37417-201ENSMUST00000195257 454 ntBASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm44960-201ENSMUST00000207403 141 ntBASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.53□□□□□ -1.84
Brf1Q8CFK2 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
Brf1Q8CFK2 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Gm24376-201ENSMUST00000104399 127 ntBASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Gm15733-201ENSMUST00000132957 242 ntBASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Gm24138-201ENSMUST00000157572 114 ntBASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Gm27997-201ENSMUST00000184942 69 ntBASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Gm9377-201ENSMUST00000207227 623 ntBASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Gm45344-201ENSMUST00000211610 341 ntBASIC3.52□□□□□ -1.85
Brf1Q8CFK2 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.52□□□□□ -1.85
Brf1Q8CFK2 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Gm23738-201ENSMUST00000082828 171 ntBASIC3.52□□□□□ -1.85
Brf1Q8CFK2 AF357428-201ENSMUST00000083815 69 ntBASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Brf1Q8CFK2 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Brf1Q8CFK2 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Gm13329-201ENSMUST00000117063 265 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Gm13355-201ENSMUST00000117996 317 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Gm13541-201ENSMUST00000119519 283 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Gm23713-201ENSMUST00000157353 70 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Gm24997-201ENSMUST00000157910 105 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Gm22615-201ENSMUST00000158102 70 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Mir5136-201ENSMUST00000175573 76 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Gm18357-201ENSMUST00000188184 580 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Snora23-201ENSMUST00000082517 184 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Gm23451-201ENSMUST00000083328 122 ntBASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Brf1Q8CFK2 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Gm25466-201ENSMUST00000103995 132 ntBASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Gm24890-201ENSMUST00000104389 102 ntBASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Gm15213-201ENSMUST00000122098 216 ntBASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Gm22560-201ENSMUST00000157332 120 ntBASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Mir6355-201ENSMUST00000183687 106 ntBASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Gm27521-201ENSMUST00000184022 64 ntBASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Gm27869-201ENSMUST00000184327 122 ntBASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Mir7047-201ENSMUST00000184595 64 ntBASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Gm27700-201ENSMUST00000185003 81 ntBASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Gm44473-201ENSMUST00000204039 152 ntBASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.5□□□□□ -1.85
Brf1Q8CFK2 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.5□□□□□ -1.85
Brf1Q8CFK2 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 133.8 ms