Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.64□□□□□ -0.237e-7■□□□□ 8.9
PRPF8Q6P2Q9 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.46□□□□□ -0.257e-7■□□□□ 8.9
PRPF8Q6P2Q9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.31□□□□□ -0.287e-7■□□□□ 8.9
PRPF8Q6P2Q9 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.37e-7■□□□□ 8.9
PRPF8Q6P2Q9 SIAH2-203ENST00000482706 427 ntTSL 313.1□□□□□ -0.311e-18■□□□□ 8.9
PRPF8Q6P2Q9 POLR1D-204ENST00000465887 2118 ntTSL 212.98□□□□□ -0.337e-7■□□□□ 8.9
PRPF8Q6P2Q9 STXBP2-213ENST00000599278 295 ntTSL 312.87□□□□□ -0.357e-7■□□□□ 8.9
PRPF8Q6P2Q9 EIF4E-202ENST00000418385 574 ntTSL 412.82□□□□□ -0.367e-7■□□□□ 8.9
PRPF8Q6P2Q9 PRKAR1A-205ENST00000585427 557 ntTSL 412.34□□□□□ -0.438e-8■□□□□ 8.9
PRPF8Q6P2Q9 CXXC5-207ENST00000504944 568 ntTSL 312.19□□□□□ -0.467e-7■□□□□ 8.9
PRPF8Q6P2Q9 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.19□□□□□ -0.467e-7■□□□□ 8.9
PRPF8Q6P2Q9 BRD9-215ENST00000518250 689 ntTSL 312.09□□□□□ -0.478e-8■□□□□ 8.9
PRPF8Q6P2Q9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.58e-8■□□□□ 8.9
PRPF8Q6P2Q9 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.577e-7■□□□□ 8.9
PRPF8Q6P2Q9 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.577e-7■□□□□ 8.9
PRPF8Q6P2Q9 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.667e-7■□□□□ 8.9
PRPF8Q6P2Q9 FBRS-203ENST00000468966 554 ntTSL 410.78□□□□□ -0.687e-7■□□□□ 8.9
PRPF8Q6P2Q9 BOD1-205ENST00000477985 850 ntTSL 210.67□□□□□ -0.74e-9■□□□□ 8.9
PRPF8Q6P2Q9 LAT-213ENST00000566415 617 ntTSL 210.59□□□□□ -0.717e-7■□□□□ 8.9
PRPF8Q6P2Q9 NCAPG2-210ENST00000491792 581 ntTSL 310.54□□□□□ -0.724e-9■□□□□ 8.9
PRPF8Q6P2Q9 NDUFS7-217ENST00000591358 3743 nt10.36□□□□□ -0.758e-8■□□□□ 8.9
PRPF8Q6P2Q9 USP1-203ENST00000442679 502 ntTSL 210.19□□□□□ -0.787e-7■□□□□ 8.9
PRPF8Q6P2Q9 COA3-201ENST00000328434 771 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.877e-7■□□□□ 8.9
PRPF8Q6P2Q9 NCAPG2-207ENST00000472591 554 ntTSL 49.61□□□□□ -0.874e-9■□□□□ 8.9
PRPF8Q6P2Q9 ZCCHC11-202ENST00000355809 2152 ntTSL 1 (best) BASIC9.37□□□□□ -0.918e-8■□□□□ 8.9
PRPF8Q6P2Q9 AC008878.1-201ENST00000597384 634 ntTSL 39.3□□□□□ -0.927e-7■□□□□ 8.9
PRPF8Q6P2Q9 CHD2-217ENST00000629136 480 ntTSL 59.26□□□□□ -0.937e-7■□□□□ 8.9
PRPF8Q6P2Q9 ENSA-202ENST00000339643 633 ntTSL 2 BASIC9.17□□□□□ -0.947e-7■□□□□ 8.9
PRPF8Q6P2Q9 AC008878.1-202ENST00000599312 382 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.957e-7■□□□□ 8.9
PRPF8Q6P2Q9 IGHMBP2-211ENST00000545475 562 ntTSL 49□□□□□ -0.977e-7■□□□□ 8.9
PRPF8Q6P2Q9 AC097637.1-201ENST00000494383 3695 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.987e-7■□□□□ 8.9
PRPF8Q6P2Q9 POLR1D-206ENST00000489647 1723 ntTSL 1 (best) BASIC8.76□□□□□ -1.017e-7■□□□□ 8.9
PRPF8Q6P2Q9 LSM14A-206ENST00000588582 3601 ntTSL 28.55□□□□□ -1.048e-8■□□□□ 8.9
PRPF8Q6P2Q9 ZNF34-203ENST00000527740 2056 ntTSL 58.27□□□□□ -1.097e-7■□□□□ 8.9
PRPF8Q6P2Q9 ENSA-213ENST00000509582 716 ntTSL 38.14□□□□□ -1.117e-7■□□□□ 8.9
PRPF8Q6P2Q9 LAT-215ENST00000568899 701 ntTSL 27.95□□□□□ -1.147e-7■□□□□ 8.9
PRPF8Q6P2Q9 C1orf43-209ENST00000493814 441 ntTSL 27.83□□□□□ -1.168e-8■□□□□ 8.9
PRPF8Q6P2Q9 ENSA-209ENST00000369016 923 ntTSL 5 BASIC7.73□□□□□ -1.177e-7■□□□□ 8.9
PRPF8Q6P2Q9 LAMC1-205ENST00000484114 657 ntTSL 37.52□□□□□ -1.28e-8■□□□□ 8.9
PRPF8Q6P2Q9 SMG6-210ENST00000572205 551 ntTSL 47.52□□□□□ -1.217e-7■□□□□ 8.9
PRPF8Q6P2Q9 SMG6-216ENST00000575176 557 ntTSL 47.52□□□□□ -1.217e-7■□□□□ 8.9
PRPF8Q6P2Q9 TMBIM6-228ENST00000553022 540 ntTSL 27.45□□□□□ -1.227e-9■□□□□ 8.9
PRPF8Q6P2Q9 ZNF282-201ENST00000462740 223 ntTSL 57.33□□□□□ -1.247e-7■□□□□ 8.9
PRPF8Q6P2Q9 MRPS31P5-204ENST00000606974 551 ntTSL 47.21□□□□□ -1.267e-7■□□□□ 8.9
PRPF8Q6P2Q9 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.95□□□□□ -1.37e-7■□□□□ 8.9
PRPF8Q6P2Q9 MRPS31P5-203ENST00000606619 564 ntTSL 46.89□□□□□ -1.317e-7■□□□□ 8.9
PRPF8Q6P2Q9 MRPS31P5-202ENST00000423686 920 ntBASIC6.68□□□□□ -1.347e-7■□□□□ 8.9
PRPF8Q6P2Q9 SMG6-205ENST00000570659 592 ntTSL 46.67□□□□□ -1.347e-7■□□□□ 8.9
PRPF8Q6P2Q9 SMG6-211ENST00000572369 689 ntTSL 36.59□□□□□ -1.367e-7■□□□□ 8.9
PRPF8Q6P2Q9 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC6.54□□□□□ -1.367e-7■□□□□ 8.9
PRPF8Q6P2Q9 SMG6-209ENST00000571442 588 ntTSL 45.87□□□□□ -1.477e-7■□□□□ 8.9
PRPF8Q6P2Q9 KDELC2-204ENST00000530318 568 ntTSL 45.82□□□□□ -1.487e-7■□□□□ 8.9
PRPF8Q6P2Q9 ARPC2-216ENST00000487321 550 ntTSL 25.62□□□□□ -1.518e-8■□□□□ 8.9
PRPF8Q6P2Q9 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC5.54□□□□□ -1.527e-7■□□□□ 8.9
PRPF8Q6P2Q9 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.537e-7■□□□□ 8.9
PRPF8Q6P2Q9 SF3B1-206ENST00000462613 141 ntTSL 35.39□□□□□ -1.557e-7■□□□□ 8.9
PRPF8Q6P2Q9 ENSA-212ENST00000505321 552 ntTSL 55.36□□□□□ -1.557e-7■□□□□ 8.9
PRPF8Q6P2Q9 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC5.25□□□□□ -1.577e-7■□□□□ 8.9
PRPF8Q6P2Q9 SMG6-219ENST00000575663 574 ntTSL 35.24□□□□□ -1.577e-7■□□□□ 8.9
PRPF8Q6P2Q9 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.15□□□□□ -1.587e-7■□□□□ 8.9
PRPF8Q6P2Q9 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.76□□□□□ -1.657e-7■□□□□ 8.9
PRPF8Q6P2Q9 IARS-204ENST00000430417 414 ntTSL 34.37□□□□□ -1.717e-7■□□□□ 8.9
PRPF8Q6P2Q9 KDELC2-205ENST00000530529 3241 ntTSL 24.36□□□□□ -1.717e-7■□□□□ 8.9
PRPF8Q6P2Q9 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.19□□□□□ -1.747e-7■□□□□ 8.9
PRPF8Q6P2Q9 ARID1B-231ENST00000637887 1468 ntTSL 53.76□□□□□ -1.818e-8■□□□□ 8.9
PRPF8Q6P2Q9 ENSA-203ENST00000354702 569 ntTSL 53.55□□□□□ -1.847e-7■□□□□ 8.9
PRPF8Q6P2Q9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC3.45□□□□□ -1.867e-7■□□□□ 8.9
PRPF8Q6P2Q9 RPS13-208ENST00000531908 746 ntTSL 23.3□□□□□ -1.888e-8■□□□□ 8.9
PRPF8Q6P2Q9 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.987e-7■□□□□ 8.9
PRPF8Q6P2Q9 ATP6V0A1-216ENST00000587882 780 ntTSL 22.53□□□□□ -27e-7■□□□□ 8.9
PRPF8Q6P2Q9 KDELC2-206ENST00000532730 589 ntTSL 52.19□□□□□ -2.067e-7■□□□□ 8.9
PRPF8Q6P2Q9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.02□□□□□ -2.097e-7■□□□□ 8.9
PRPF8Q6P2Q9 POLR1D-214ENST00000636226 100 ntTSL 51.97□□□□□ -2.097e-7■□□□□ 8.9
PRPF8Q6P2Q9 EIF4E-205ENST00000504472 588 ntTSL 41.75□□□□□ -2.137e-7■□□□□ 8.9
PRPF8Q6P2Q9 PRPF40A-206ENST00000471167 333 ntTSL 21.65□□□□□ -2.158e-8■□□□□ 8.9
PRPF8Q6P2Q9 RPS13-207ENST00000531008 594 ntTSL 21.61□□□□□ -2.158e-8■□□□□ 8.9
PRPF8Q6P2Q9 CLNS1A-203ENST00000525359 283 ntTSL 20.36□□□□□ -2.358e-8■□□□□ 8.9
PRPF8Q6P2Q9 POLR1D-222ENST00000637389 129 ntTSL 5-0.73□□□□□ -2.537e-7■□□□□ 8.9
PRPF8Q6P2Q9 PRPF40A-207ENST00000471701 293 ntTSL 2-2.6□□□□□ -2.838e-8■□□□□ 8.9
PRPF8Q6P2Q9 LEPR-206ENST00000462765 2117 ntTSL 1 (best)12.95□□□□□ -0.349e-7■□□□□ 8.9
PRPF8Q6P2Q9 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC9.47□□□□□ -0.899e-7■□□□□ 8.9
PRPF8Q6P2Q9 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.49□□□□□ -1.699e-7■□□□□ 8.9
PRPF8Q6P2Q9 TOB1-203ENST00000509385 889 ntTSL 212.71□□□□□ -0.378e-12■□□□□ 8.8
PRPF8Q6P2Q9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.448e-12■□□□□ 8.8
PRPF8Q6P2Q9 TOB1-201ENST00000268957 1467 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.028e-12■□□□□ 8.8
PRPF8Q6P2Q9 SQSTM1-208ENST00000485412 656 ntTSL 212.25□□□□□ -0.458e-15■□□□□ 8.8
PRPF8Q6P2Q9 GNAS-231ENST00000475610 493 ntTSL 1 (best)8.93□□□□□ -0.983e-14■□□□□ 8.8
PRPF8Q6P2Q9 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.82□□□□□ -0.363e-6■□□□□ 8.8
PRPF8Q6P2Q9 MASP2-204ENST00000480221 2190 ntTSL 1 (best)11.68□□□□□ -0.543e-6■□□□□ 8.8
PRPF8Q6P2Q9 MASP2-201ENST00000400897 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.793e-6■□□□□ 8.8
PRPF8Q6P2Q9 SH3BP2-206ENST00000503219 551 ntTSL 413.78□□□□□ -0.22e-7■□□□□ 8.8
PRPF8Q6P2Q9 SH3BP2-205ENST00000502260 727 ntTSL 311.99□□□□□ -0.492e-7■□□□□ 8.8
PRPF8Q6P2Q9 SH3BP2-224ENST00000513020 868 ntTSL 310.06□□□□□ -0.82e-7■□□□□ 8.8
PRPF8Q6P2Q9 ZNF271P-204ENST00000639141 1865 ntTSL 212.56□□□□□ -0.45e-7■□□□□ 8.8
PRPF8Q6P2Q9 TNFAIP2-204ENST00000559255 1410 ntTSL 212□□□□□ -0.495e-7■□□□□ 8.8
PRPF8Q6P2Q9 PAPD4-205ENST00000502269 705 ntTSL 311.71□□□□□ -0.535e-7■□□□□ 8.8
PRPF8Q6P2Q9 WAC-216ENST00000495268 546 ntTSL 48.58□□□□□ -1.045e-7■□□□□ 8.8
PRPF8Q6P2Q9 ZNF271P-203ENST00000638208 2191 ntTSL 1 (best)7.71□□□□□ -1.175e-7■□□□□ 8.8
PRPF8Q6P2Q9 ITGA5-205ENST00000549601 505 ntTSL 27.55□□□□□ -1.25e-7■□□□□ 8.8
PRPF8Q6P2Q9 CHD2-211ENST00000627460 760 ntTSL 56.8□□□□□ -1.325e-7■□□□□ 8.8
Retrieved 100 of 73,762 protein–RNA pairs in 7341.4 ms