Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm25848-201ENSMUST00000116790 144 ntBASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Gm22032-201ENSMUST00000116946 116 ntBASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Gm12155-201ENSMUST00000121267 160 ntBASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Gm22791-201ENSMUST00000157232 145 ntBASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Gm26186-201ENSMUST00000157689 125 ntBASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Gm20698-201ENSMUST00000175657 233 ntBASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Gm26430-201ENSMUST00000178054 107 ntBASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Gm43505-201ENSMUST00000200579 139 ntBASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Gm19572-201ENSMUST00000214326 338 ntBASIC2.43□□□□□ -2.02
Trim58Q5NCC9 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Gm25475-201ENSMUST00000082825 180 ntBASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Gm24698-201ENSMUST00000083883 130 ntBASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Olfr575-201ENSMUST00000084812 957 ntBASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.43□□□□□ -2.02
Trim58Q5NCC9 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm23551-201ENSMUST00000116852 121 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm11785-201ENSMUST00000120165 601 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm24839-201ENSMUST00000122602 107 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm25339-201ENSMUST00000157458 232 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm25909-201ENSMUST00000157619 121 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm24853-201ENSMUST00000158026 121 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm25434-201ENSMUST00000158278 167 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm22668-201ENSMUST00000158716 260 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm17161-201ENSMUST00000169187 524 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm8114-201ENSMUST00000172225 484 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm22192-201ENSMUST00000175128 85 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm28627-201ENSMUST00000186141 453 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm37377-201ENSMUST00000191733 304 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm43723-201ENSMUST00000196886 189 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm43578-201ENSMUST00000201250 459 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm44041-201ENSMUST00000203678 396 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm44533-201ENSMUST00000207782 268 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.42□□□□□ -2.02
Trim58Q5NCC9 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm22364-201ENSMUST00000083097 98 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm25632-201ENSMUST00000083112 85 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.42□□□□□ -2.02
Trim58Q5NCC9 Gm22494-201ENSMUST00000104495 128 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm23987-201ENSMUST00000117039 129 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm5287-201ENSMUST00000120666 598 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm11471-201ENSMUST00000121824 198 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm14775-201ENSMUST00000122089 310 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm26278-201ENSMUST00000157098 132 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm26275-201ENSMUST00000157101 268 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm23469-201ENSMUST00000157131 104 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm23435-201ENSMUST00000157183 156 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm25335-201ENSMUST00000158043 103 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm25642-201ENSMUST00000175137 66 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm23725-201ENSMUST00000177876 107 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm23963-201ENSMUST00000179603 77 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm23862-201ENSMUST00000180342 94 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Mir6402-201ENSMUST00000183406 80 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm45395-201ENSMUST00000209891 559 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm45815-201ENSMUST00000220241 146 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm25698-201ENSMUST00000082897 107 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.41□□□□□ -2.02
Trim58Q5NCC9 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.4□□□□□ -2.02
Trim58Q5NCC9 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Gm14629-201ENSMUST00000122428 144 ntBASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Gm22038-201ENSMUST00000157277 242 ntBASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Gm26414-201ENSMUST00000157674 269 ntBASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Gm20543-201ENSMUST00000174200 726 ntBASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Gm23813-201ENSMUST00000175153 77 ntBASIC2.4□□□□□ -2.03
Trim58Q5NCC9 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Mir7062-201ENSMUST00000185038 66 ntBASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Gm27588-201ENSMUST00000185096 263 ntBASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Gm18356-201ENSMUST00000185677 623 ntBASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Gm37557-201ENSMUST00000191640 139 ntBASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Gm33354-201ENSMUST00000195448 906 ntBASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trim58Q5NCC9 AC124346.1-201ENSMUST00000218539 364 ntBASIC2.4□□□□□ -2.03
Trim58Q5NCC9 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.4□□□□□ -2.03
Trim58Q5NCC9 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Snord14d-201ENSMUST00000083424 86 ntBASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.4□□□□□ -2.03
Trim58Q5NCC9 Gm14390-201ENSMUST00000117505 1695 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 131 ms