Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RpainQ9CWY9 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RpainQ9CWY9 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RpainQ9CWY9 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
RpainQ9CWY9 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RpainQ9CWY9 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm23990-201ENSMUST00000117031 117 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm25321-201ENSMUST00000122558 102 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm24839-201ENSMUST00000122602 107 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm22320-201ENSMUST00000157149 312 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm22315-201ENSMUST00000158010 143 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm22611-201ENSMUST00000158288 150 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm24553-201ENSMUST00000158653 131 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm25369-201ENSMUST00000158848 132 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm23002-201ENSMUST00000179221 107 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm22450-201ENSMUST00000179641 107 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm25473-201ENSMUST00000180191 107 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Mir8106-201ENSMUST00000184520 139 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm28849-201ENSMUST00000188127 174 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm28330-201ENSMUST00000190353 171 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm37617-201ENSMUST00000194309 159 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm32222-201ENSMUST00000203296 298 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm23736-201ENSMUST00000082553 75 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm26071-201ENSMUST00000083261 107 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm25411-201ENSMUST00000083760 151 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm24521-201ENSMUST00000083958 107 ntBASIC3.7□□□□□ -1.82
RpainQ9CWY9 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RpainQ9CWY9 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RpainQ9CWY9 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RpainQ9CWY9 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RpainQ9CWY9 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RpainQ9CWY9 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm12458-201ENSMUST00000119387 495 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm6071-201ENSMUST00000119561 440 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm22107-201ENSMUST00000122548 100 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm23183-201ENSMUST00000122595 323 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm23887-201ENSMUST00000122683 172 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm23752-201ENSMUST00000157584 115 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm25015-201ENSMUST00000158400 128 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm25024-201ENSMUST00000179667 104 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Mir6540-201ENSMUST00000184886 108 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm37428-201ENSMUST00000193886 137 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm19620-201ENSMUST00000195972 434 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Mir376a-201ENSMUST00000197584 68 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm44010-201ENSMUST00000204432 331 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.69□□□□□ -1.82
RpainQ9CWY9 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.69□□□□□ -1.82
RpainQ9CWY9 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RpainQ9CWY9 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RpainQ9CWY9 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.69□□□□□ -1.82
RpainQ9CWY9 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RpainQ9CWY9 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RpainQ9CWY9 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RpainQ9CWY9 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Mir693-201ENSMUST00000102187 89 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Mir291a-201ENSMUST00000104815 82 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Gm25572-201ENSMUST00000157527 172 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Gm23640-201ENSMUST00000157860 104 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Gm17117-201ENSMUST00000163665 299 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Gm17100-201ENSMUST00000168963 272 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Mir6408-201ENSMUST00000183643 91 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Gm29022-201ENSMUST00000190702 225 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Gm29704-201ENSMUST00000196011 253 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Gm43427-201ENSMUST00000198188 331 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Gm5002-201ENSMUST00000207145 223 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Gm22062-201ENSMUST00000082563 107 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Gm24626-201ENSMUST00000082621 161 ntBASIC3.68□□□□□ -1.82
RpainQ9CWY9 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RpainQ9CWY9 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.67□□□□□ -1.82
RpainQ9CWY9 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RpainQ9CWY9 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RpainQ9CWY9 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RpainQ9CWY9 Gm24172-201ENSMUST00000104127 117 ntBASIC3.67□□□□□ -1.82
RpainQ9CWY9 Snord19-201ENSMUST00000104609 76 ntBASIC3.67□□□□□ -1.82
RpainQ9CWY9 Gm25105-201ENSMUST00000122477 130 ntBASIC3.67□□□□□ -1.82
RpainQ9CWY9 Gm22026-201ENSMUST00000122735 281 ntBASIC3.67□□□□□ -1.82
RpainQ9CWY9 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC3.67□□□□□ -1.82
RpainQ9CWY9 Gm23219-201ENSMUST00000158123 87 ntBASIC3.67□□□□□ -1.82
RpainQ9CWY9 Gm26005-201ENSMUST00000158802 134 ntBASIC3.67□□□□□ -1.82
RpainQ9CWY9 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.67□□□□□ -1.82
RpainQ9CWY9 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RpainQ9CWY9 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.67□□□□□ -1.82
RpainQ9CWY9 Gm6796-201ENSMUST00000211919 243 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 137.2 ms