Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm26080-201ENSMUST00000104069 131 ntBASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 Gm14558-201ENSMUST00000117458 381 ntBASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 Gm13885-201ENSMUST00000117569 187 ntBASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 Gm14428-201ENSMUST00000120408 822 ntBASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 Gm23078-201ENSMUST00000157848 148 ntBASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 Gm29950-201ENSMUST00000195273 237 ntBASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 Gm44128-201ENSMUST00000204909 219 ntBASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 Gm22543-201ENSMUST00000104347 94 ntBASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 Gm25888-201ENSMUST00000157778 302 ntBASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 Gm28404-201ENSMUST00000190242 453 ntBASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 Gm21064-202ENSMUST00000190583 278 ntBASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 Gm43723-201ENSMUST00000196886 189 ntBASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.4□□□□□ -2.19
Rpa3Q9CQ71 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Rpa3Q9CQ71 Gm25938-201ENSMUST00000104139 166 ntBASIC1.39□□□□□ -2.19
Rpa3Q9CQ71 Gm14989-201ENSMUST00000120497 207 ntBASIC1.39□□□□□ -2.19
Rpa3Q9CQ71 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.39□□□□□ -2.19
Rpa3Q9CQ71 Gm24262-201ENSMUST00000157431 144 ntBASIC1.39□□□□□ -2.19
Rpa3Q9CQ71 Gm22315-201ENSMUST00000158010 143 ntBASIC1.39□□□□□ -2.19
Rpa3Q9CQ71 Gm25365-201ENSMUST00000158852 121 ntBASIC1.39□□□□□ -2.19
Rpa3Q9CQ71 Gm21978-201ENSMUST00000179696 377 ntBASIC1.39□□□□□ -2.19
Rpa3Q9CQ71 Gm28283-201ENSMUST00000185509 178 ntBASIC1.39□□□□□ -2.19
Rpa3Q9CQ71 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.39□□□□□ -2.19
Rpa3Q9CQ71 Gm44564-201ENSMUST00000207985 180 ntBASIC1.39□□□□□ -2.19
Rpa3Q9CQ71 Gm17991-201ENSMUST00000208139 297 ntBASIC1.39□□□□□ -2.19
Rpa3Q9CQ71 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC1.39□□□□□ -2.19
Rpa3Q9CQ71 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.39□□□□□ -2.19
Rpa3Q9CQ71 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.39□□□□□ -2.19
Rpa3Q9CQ71 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Gm22678-201ENSMUST00000116974 101 ntBASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Gm15175-201ENSMUST00000117629 132 ntBASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Gm22082-201ENSMUST00000157587 161 ntBASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Gm24784-201ENSMUST00000157640 62 ntBASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Gm25454-201ENSMUST00000157947 315 ntBASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Gm25035-201ENSMUST00000175414 77 ntBASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Gm24573-201ENSMUST00000175499 112 ntBASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Mir6341-201ENSMUST00000183490 121 ntBASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Mir7014-201ENSMUST00000183853 63 ntBASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Gm27898-201ENSMUST00000183987 80 ntBASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Gm19123-201ENSMUST00000190716 651 ntBASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Gm23516-201ENSMUST00000093728 107 ntBASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
Rpa3Q9CQ71 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.37□□□□□ -2.19
Rpa3Q9CQ71 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.37□□□□□ -2.19
Rpa3Q9CQ71 Gm18356-201ENSMUST00000185677 623 ntBASIC1.37□□□□□ -2.19
Rpa3Q9CQ71 Gm29603-201ENSMUST00000186792 334 ntBASIC1.37□□□□□ -2.19
Rpa3Q9CQ71 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC1.37□□□□□ -2.19
Rpa3Q9CQ71 Gm37102-201ENSMUST00000195740 1105 ntBASIC1.37□□□□□ -2.19
Rpa3Q9CQ71 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.37□□□□□ -2.19
Rpa3Q9CQ71 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.37□□□□□ -2.19
Rpa3Q9CQ71 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Rpa3Q9CQ71 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.37□□□□□ -2.19
Rpa3Q9CQ71 AC192334.2-201ENSMUST00000223087 1091 ntBASIC1.37□□□□□ -2.19
Rpa3Q9CQ71 Gm26203-201ENSMUST00000082911 114 ntBASIC1.37□□□□□ -2.19
Rpa3Q9CQ71 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.37□□□□□ -2.19
Rpa3Q9CQ71 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
Rpa3Q9CQ71 Gm25088-201ENSMUST00000101803 79 ntBASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 Gm23744-201ENSMUST00000104231 149 ntBASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 Mir466n-201ENSMUST00000104798 94 ntBASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 Gm12304-201ENSMUST00000120312 385 ntBASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 Gm24997-201ENSMUST00000157910 105 ntBASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 Gm29550-201ENSMUST00000185543 285 ntBASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 Gm28453-203ENSMUST00000187041 189 ntBASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 Gm29216-201ENSMUST00000187117 492 ntBASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 Gm18691-201ENSMUST00000203593 872 ntBASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 Gm17911-201ENSMUST00000210806 877 ntBASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.36□□□□□ -2.19
Rpa3Q9CQ71 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 220.8 ms