Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm25384-201ENSMUST00000157807 105 ntBASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 Gm18357-201ENSMUST00000188184 580 ntBASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 Gm43286-201ENSMUST00000197420 424 ntBASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 Gm43746-201ENSMUST00000200028 317 ntBASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 Gm44964-201ENSMUST00000207011 273 ntBASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 Gm44960-201ENSMUST00000207403 141 ntBASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 Gm45313-201ENSMUST00000210584 178 ntBASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm13329-201ENSMUST00000117063 265 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm14877-201ENSMUST00000119803 478 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm23865-201ENSMUST00000157723 97 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm25184-201ENSMUST00000157753 163 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm26297-201ENSMUST00000179464 132 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm27783-201ENSMUST00000183534 105 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm28629-201ENSMUST00000187309 263 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm44266-201ENSMUST00000205235 500 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm22620-201ENSMUST00000082700 133 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm22507-201ENSMUST00000082773 160 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Pcdha9Q91Y11 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Gm26500-201ENSMUST00000101867 106 ntBASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Gm24338-201ENSMUST00000104205 127 ntBASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Gm22187-201ENSMUST00000157819 129 ntBASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Gm24501-201ENSMUST00000158452 62 ntBASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Gm6660-201ENSMUST00000179149 468 ntBASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Snora23-201ENSMUST00000082517 184 ntBASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Gm23451-201ENSMUST00000083328 122 ntBASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Pcdha9Q91Y11 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Gm12723-201ENSMUST00000120700 451 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Gm23716-201ENSMUST00000157348 144 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Gm23542-201ENSMUST00000158208 96 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Gm23759-201ENSMUST00000158351 268 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Gm27997-201ENSMUST00000184942 69 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Mir7661-201ENSMUST00000197023 61 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Gm2829-201ENSMUST00000213121 499 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 AL606472.1-201ENSMUST00000224628 275 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Gm22685-201ENSMUST00000082848 106 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Mir137-201ENSMUST00000083635 73 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.28□□□□□ -1.88
Pcdha9Q91Y11 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.89
Pcdha9Q91Y11 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
Pcdha9Q91Y11 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.28□□□□□ -1.89
Pcdha9Q91Y11 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Pcdha9Q91Y11 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Pcdha9Q91Y11 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Pcdha9Q91Y11 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Pcdha9Q91Y11 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Pcdha9Q91Y11 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Pcdha9Q91Y11 Gm24403-201ENSMUST00000104616 130 ntBASIC3.27□□□□□ -1.89
Pcdha9Q91Y11 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Pcdha9Q91Y11 Gm15714-201ENSMUST00000117168 250 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 135.3 ms