Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 DHCR7-204ENST00000525346 520 ntTSL 414.25□□□□□ -0.134e-6■□□□□ 9
PRPF8Q6P2Q9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.354e-6■□□□□ 9
PRPF8Q6P2Q9 DHCR7-207ENST00000527452 579 ntTSL 412.24□□□□□ -0.454e-6■□□□□ 9
PRPF8Q6P2Q9 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.534e-6■□□□□ 9
PRPF8Q6P2Q9 IGDCC3-205ENST00000559947 844 ntTSL 39.94□□□□□ -0.823e-20■□□□□ 8.9
PRPF8Q6P2Q9 ARMC6-213ENST00000540634 1320 ntTSL 514.16□□□□□ -0.147e-9■□□□□ 8.9
PRPF8Q6P2Q9 EXOC3L4-205ENST00000560102 563 ntTSL 318.33■□□□□ 0.521e-15■□□□□ 8.9
PRPF8Q6P2Q9 SURF6-202ENST00000468290 935 ntTSL 215.59■□□□□ 0.091e-6■□□□□ 8.9
PRPF8Q6P2Q9 TNFAIP3-203ENST00000421450 421 ntTSL 214.98□□□□□ -0.011e-6■□□□□ 8.9
PRPF8Q6P2Q9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.559e-8■□□□□ 8.9
PRPF8Q6P2Q9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.314e-13■□□□□ 8.9
PRPF8Q6P2Q9 EHBP1L1-210ENST00000533465 793 ntTSL 316.61■□□□□ 0.251e-7■□□□□ 8.9
PRPF8Q6P2Q9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.73□□□□□ -0.211e-7■□□□□ 8.9
PRPF8Q6P2Q9 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC12.02□□□□□ -0.491e-6■□□□□ 8.9
PRPF8Q6P2Q9 EHBP1L1-202ENST00000526990 3169 nt10.47□□□□□ -0.731e-7■□□□□ 8.9
PRPF8Q6P2Q9 LINC00470-211ENST00000584492 1281 ntTSL 1 (best) BASIC10.39□□□□□ -0.751e-6■□□□□ 8.9
PRPF8Q6P2Q9 AC087380.1-204ENST00000418729 1026 ntTSL 1 (best)10.19□□□□□ -0.781e-7■□□□□ 8.9
PRPF8Q6P2Q9 TSC22D2-201ENST00000361875 11154 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.861e-7■□□□□ 8.9
PRPF8Q6P2Q9 LINC00470-203ENST00000577867 1211 ntTSL 1 (best)9.47□□□□□ -0.891e-6■□□□□ 8.9
PRPF8Q6P2Q9 LINC00470-201ENST00000412816 2031 ntTSL 2 BASIC7.89□□□□□ -1.151e-6■□□□□ 8.9
PRPF8Q6P2Q9 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.191e-7■□□□□ 8.9
PRPF8Q6P2Q9 LINC00470-207ENST00000581430 556 ntTSL 56.57□□□□□ -1.361e-6■□□□□ 8.9
PRPF8Q6P2Q9 AC087380.1-201ENST00000420465 1001 ntTSL 36.23□□□□□ -1.411e-7■□□□□ 8.9
PRPF8Q6P2Q9 LINC00470-204ENST00000578835 674 ntTSL 25.4□□□□□ -1.541e-6■□□□□ 8.9
PRPF8Q6P2Q9 AC087380.1-203ENST00000420726 752 ntTSL 54.96□□□□□ -1.621e-7■□□□□ 8.9
PRPF8Q6P2Q9 TSC22D2-203ENST00000466814 2093 ntAPPRIS ALT2 TSL 1 (best)4.95□□□□□ -1.621e-7■□□□□ 8.9
PRPF8Q6P2Q9 CCAR1-205ENST00000483264 487 ntTSL 54.83□□□□□ -1.644e-13■□□□□ 8.9
PRPF8Q6P2Q9 HBE1-203ENST00000396895 578 ntTSL 54.43□□□□□ -1.71e-7■□□□□ 8.9
PRPF8Q6P2Q9 TSC22D2-205ENST00000485421 715 ntTSL 1 (best)3.93□□□□□ -1.781e-7■□□□□ 8.9
PRPF8Q6P2Q9 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.83□□□□□ -1.81e-7■□□□□ 8.9
PRPF8Q6P2Q9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC2.84□□□□□ -1.951e-7■□□□□ 8.9
PRPF8Q6P2Q9 CCAR1-203ENST00000479143 478 ntTSL 52.77□□□□□ -1.974e-13■□□□□ 8.9
PRPF8Q6P2Q9 LINC00470-206ENST00000581212 721 ntTSL 1 (best)2.44□□□□□ -2.021e-6■□□□□ 8.9
PRPF8Q6P2Q9 KIF23-209ENST00000559456 1282 ntTSL 31.58□□□□□ -2.161e-6■□□□□ 8.9
PRPF8Q6P2Q9 TSC22D2-204ENST00000480589 826 ntTSL 30.75□□□□□ -2.291e-7■□□□□ 8.9
PRPF8Q6P2Q9 LINC00470-202ENST00000577403 251 ntTSL 1 (best)0.54□□□□□ -2.321e-6■□□□□ 8.9
PRPF8Q6P2Q9 LINC00470-209ENST00000582862 424 ntTSL 1 (best)0.54□□□□□ -2.321e-6■□□□□ 8.9
PRPF8Q6P2Q9 NCOR2-221ENST00000494460 339 ntTSL 316.53■□□□□ 0.246e-7■□□□□ 8.9
PRPF8Q6P2Q9 CIZ1-220ENST00000485862 843 ntTSL 213.68□□□□□ -0.228e-7■□□□□ 8.9
PRPF8Q6P2Q9 CIZ1-210ENST00000461765 677 ntTSL 37.7□□□□□ -1.188e-7■□□□□ 8.9
PRPF8Q6P2Q9 TAL1-206ENST00000481091 504 ntTSL 313.51□□□□□ -0.253e-9■□□□□ 8.9
PRPF8Q6P2Q9 TAL1-205ENST00000465912 433 ntTSL 57.07□□□□□ -1.283e-9■□□□□ 8.9
PRPF8Q6P2Q9 ITIH3-205ENST00000465243 824 ntTSL 58.24□□□□□ -1.094e-8■□□□□ 8.9
PRPF8Q6P2Q9 USP34-219ENST00000492604 527 ntTSL 40.77□□□□□ -2.291e-6■□□□□ 8.9
PRPF8Q6P2Q9 AKR1C1-204ENST00000476100 713 ntTSL 28.86□□□□□ -0.993e-9■□□□□ 8.9
PRPF8Q6P2Q9 PLXND1-207ENST00000504979 591 ntTSL 315.88■□□□□ 0.136e-7■□□□□ 8.9
PRPF8Q6P2Q9 PTMS-206ENST00000540874 501 ntTSL 215.76■□□□□ 0.115e-10■□□□□ 8.9
PRPF8Q6P2Q9 TNRC18-208ENST00000455076 577 ntTSL 217.48■□□□□ 0.392e-11■□□□□ 8.9
PRPF8Q6P2Q9 HDLBP-234ENST00000471294 490 ntTSL 49.93□□□□□ -0.822e-17■□□□□ 8.9
PRPF8Q6P2Q9 PACSIN3-203ENST00000525725 683 ntTSL 218.6■□□□□ 0.577e-7■□□□□ 8.9
PRPF8Q6P2Q9 PACSIN3-206ENST00000530405 563 ntTSL 314.63□□□□□ -0.077e-7■□□□□ 8.9
PRPF8Q6P2Q9 NHSL1-207ENST00000491526 506 ntAPPRIS ALT2 TSL 311.71□□□□□ -0.537e-8■□□□□ 8.9
PRPF8Q6P2Q9 FCGRT-214ENST00000598927 1616 ntTSL 514.77□□□□□ -0.041e-6■□□□□ 8.9
PRPF8Q6P2Q9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.081e-6■□□□□ 8.9
PRPF8Q6P2Q9 FCGRT-209ENST00000596147 383 ntTSL 314.49□□□□□ -0.091e-6■□□□□ 8.9
PRPF8Q6P2Q9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.161e-6■□□□□ 8.9
PRPF8Q6P2Q9 SLC7A5-202ENST00000563489 780 ntTSL 213.2□□□□□ -0.34e-15■□□□□ 8.9
PRPF8Q6P2Q9 HOXB2-203ENST00000571287 625 ntTSL 320.38■□□□□ 0.851e-10■□□□□ 8.9
PRPF8Q6P2Q9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.31e-10■□□□□ 8.9
PRPF8Q6P2Q9 ARRDC3-206ENST00000511391 821 ntTSL 20.97□□□□□ -2.251e-10■□□□□ 8.9
PRPF8Q6P2Q9 GPR108-206ENST00000595108 831 ntTSL 216.19■□□□□ 0.188e-7■□□□□ 8.9
PRPF8Q6P2Q9 GPR108-207ENST00000595620 595 ntTSL 216.03■□□□□ 0.168e-7■□□□□ 8.9
PRPF8Q6P2Q9 GPR108-216ENST00000601402 816 ntTSL 312.62□□□□□ -0.398e-7■□□□□ 8.9
PRPF8Q6P2Q9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.477e-7■□□□□ 8.9
PRPF8Q6P2Q9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.59■■□□□ 1.214e-9■□□□□ 8.9
PRPF8Q6P2Q9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.59■■□□□ 1.214e-9■□□□□ 8.9
PRPF8Q6P2Q9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.127e-7■□□□□ 8.9
PRPF8Q6P2Q9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.824e-9■□□□□ 8.9
PRPF8Q6P2Q9 UNC119B-203ENST00000618898 896 nt19.96■□□□□ 0.797e-7■□□□□ 8.9
PRPF8Q6P2Q9 BOD1-204ENST00000471339 688 ntTSL 419.8■□□□□ 0.764e-9■□□□□ 8.9
PRPF8Q6P2Q9 ZNF34-205ENST00000534445 582 ntTSL 319.24■□□□□ 0.677e-7■□□□□ 8.9
PRPF8Q6P2Q9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.657e-7■□□□□ 8.9
PRPF8Q6P2Q9 POLR1D-210ENST00000627604 565 ntTSL 418.74■□□□□ 0.597e-7■□□□□ 8.9
PRPF8Q6P2Q9 CXXC5-209ENST00000507139 472 ntTSL 418.69■□□□□ 0.587e-7■□□□□ 8.9
PRPF8Q6P2Q9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.66■□□□□ 0.588e-8■□□□□ 8.9
PRPF8Q6P2Q9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.35■□□□□ 0.538e-8■□□□□ 8.9
PRPF8Q6P2Q9 TMCO6-206ENST00000509217 540 ntTSL 418.34■□□□□ 0.538e-8■□□□□ 8.9
PRPF8Q6P2Q9 CXXC5-206ENST00000504844 777 ntTSL 218.29■□□□□ 0.527e-7■□□□□ 8.9
PRPF8Q6P2Q9 RCN2-204ENST00000557805 691 ntTSL 317.81■□□□□ 0.448e-8■□□□□ 8.9
PRPF8Q6P2Q9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.51■□□□□ 0.398e-8■□□□□ 8.9
PRPF8Q6P2Q9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.331e-18■□□□□ 8.9
PRPF8Q6P2Q9 ZCCHC11-217ENST00000524582 539 ntTSL 417.08■□□□□ 0.338e-8■□□□□ 8.9
PRPF8Q6P2Q9 ANAPC1-206ENST00000467878 580 ntTSL 217.01■□□□□ 0.314e-9■□□□□ 8.9
PRPF8Q6P2Q9 ZCCHC11-208ENST00000470626 883 ntTSL 316.46■□□□□ 0.238e-8■□□□□ 8.9
PRPF8Q6P2Q9 ANAPC1-209ENST00000489177 1809 ntTSL 516.37■□□□□ 0.214e-9■□□□□ 8.9
PRPF8Q6P2Q9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.3■□□□□ 0.27e-7■□□□□ 8.9
PRPF8Q6P2Q9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.27■□□□□ 0.27e-7■□□□□ 8.9
PRPF8Q6P2Q9 COA3-202ENST00000586680 1374 ntTSL 216.18■□□□□ 0.187e-7■□□□□ 8.9
PRPF8Q6P2Q9 LRCH4-206ENST00000485583 571 ntTSL 215.67■□□□□ 0.14e-9■□□□□ 8.9
PRPF8Q6P2Q9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.46■□□□□ 0.077e-7■□□□□ 8.9
PRPF8Q6P2Q9 PIGQ-210ENST00000476438 1775 ntTSL 215.2■□□□□ 0.027e-7■□□□□ 8.9
PRPF8Q6P2Q9 LAT-216ENST00000570232 707 ntAPPRIS ALT2 TSL 514.75□□□□□ -0.057e-7■□□□□ 8.9
PRPF8Q6P2Q9 IGHMBP2-206ENST00000541229 549 ntTSL 1 (best)14.47□□□□□ -0.097e-7■□□□□ 8.9
PRPF8Q6P2Q9 CXXC5-202ENST00000502295 503 ntTSL 414.27□□□□□ -0.127e-7■□□□□ 8.9
PRPF8Q6P2Q9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.25□□□□□ -0.137e-7■□□□□ 8.9
PRPF8Q6P2Q9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.19□□□□□ -0.148e-8■□□□□ 8.9
PRPF8Q6P2Q9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.02□□□□□ -0.177e-7■□□□□ 8.9
PRPF8Q6P2Q9 ZNF358-201ENST00000596712 662 ntTSL 313.99□□□□□ -0.177e-7■□□□□ 8.9
PRPF8Q6P2Q9 EPHB4-209ENST00000492878 769 ntTSL 513.79□□□□□ -0.28e-8■□□□□ 8.9
PRPF8Q6P2Q9 LAT-210ENST00000564447 2443 ntTSL 213.65□□□□□ -0.227e-7■□□□□ 8.9
Retrieved 100 of 73,762 protein–RNA pairs in 4277 ms