Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm22806-201ENSMUST00000082738 136 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm25853-201ENSMUST00000082793 132 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm25698-201ENSMUST00000082897 107 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trim3Q9R1R2 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Mir1942-201ENSMUST00000157274 63 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm23196-201ENSMUST00000158806 107 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Mir3103-201ENSMUST00000175474 67 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm24418-201ENSMUST00000177597 79 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm24639-201ENSMUST00000178518 79 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm23076-201ENSMUST00000179082 79 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm6660-201ENSMUST00000179149 468 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm25077-201ENSMUST00000179157 79 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm28343-201ENSMUST00000185386 112 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm28825-201ENSMUST00000186233 238 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm28437-201ENSMUST00000190277 783 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm43007-201ENSMUST00000197618 291 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm44910-201ENSMUST00000208451 396 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm29809-201ENSMUST00000218423 493 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.12□□□□□ -2.07
Trim3Q9R1R2 Gm23472-201ENSMUST00000101806 191 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm26342-201ENSMUST00000104557 129 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm14848-201ENSMUST00000121850 467 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm14775-201ENSMUST00000122089 310 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm23752-201ENSMUST00000157584 115 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm25335-201ENSMUST00000158043 103 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm24358-201ENSMUST00000158424 288 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm24878-201ENSMUST00000158782 104 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm24497-201ENSMUST00000177868 191 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm25939-201ENSMUST00000179876 191 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm6059-201ENSMUST00000196903 340 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Mir7217-201ENSMUST00000200304 62 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm45013-201ENSMUST00000206883 178 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC2.11□□□□□ -2.07
Trim3Q9R1R2 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 AC129208.2-201ENSMUST00000228506 320 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm23444-201ENSMUST00000082922 191 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trim3Q9R1R2 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm26015-201ENSMUST00000104402 125 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm14894-201ENSMUST00000117170 270 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm15896-201ENSMUST00000118045 440 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm24937-201ENSMUST00000122597 134 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm24900-201ENSMUST00000158128 134 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm24769-201ENSMUST00000158506 129 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm24056-201ENSMUST00000158617 146 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm23022-201ENSMUST00000158768 180 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm16561-201ENSMUST00000163001 192 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm26652-202ENSMUST00000181672 475 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm37449-201ENSMUST00000193016 270 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm18658-201ENSMUST00000195558 270 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm44870-201ENSMUST00000207291 357 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 AC120394.1-201ENSMUST00000217153 351 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm23517-201ENSMUST00000082830 192 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Gm22353-201ENSMUST00000083918 136 ntBASIC2.1□□□□□ -2.07
Trim3Q9R1R2 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
Trim3Q9R1R2 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.09□□□□□ -2.07
Trim3Q9R1R2 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Trim3Q9R1R2 Gm23184-201ENSMUST00000122594 131 ntBASIC2.09□□□□□ -2.07
Trim3Q9R1R2 Gm24601-201ENSMUST00000157970 143 ntBASIC2.09□□□□□ -2.07
Trim3Q9R1R2 Mir5118-201ENSMUST00000175551 67 ntBASIC2.09□□□□□ -2.07
Trim3Q9R1R2 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trim3Q9R1R2 Gm28838-201ENSMUST00000186338 315 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 261.9 ms