Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm25812-201ENSMUST00000082751 103 ntBASIC3.75□□□□□ -1.81
RpainQ9CWY9 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
RpainQ9CWY9 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.75□□□□□ -1.81
RpainQ9CWY9 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RpainQ9CWY9 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.75□□□□□ -1.81
RpainQ9CWY9 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
RpainQ9CWY9 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.74□□□□□ -1.81
RpainQ9CWY9 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.74□□□□□ -1.81
RpainQ9CWY9 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RpainQ9CWY9 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
RpainQ9CWY9 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RpainQ9CWY9 Gm24997-201ENSMUST00000157910 105 ntBASIC3.74□□□□□ -1.81
RpainQ9CWY9 Gm22118-201ENSMUST00000175593 171 ntBASIC3.74□□□□□ -1.81
RpainQ9CWY9 Mir6914-201ENSMUST00000184999 69 ntBASIC3.74□□□□□ -1.81
RpainQ9CWY9 Gm18956-201ENSMUST00000192857 480 ntBASIC3.74□□□□□ -1.81
RpainQ9CWY9 Gm42623-201ENSMUST00000197225 379 ntBASIC3.74□□□□□ -1.81
RpainQ9CWY9 Gm43749-201ENSMUST00000199345 352 ntBASIC3.74□□□□□ -1.81
RpainQ9CWY9 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RpainQ9CWY9 Gm20144-201ENSMUST00000203031 165 ntBASIC3.74□□□□□ -1.81
RpainQ9CWY9 Gm44294-201ENSMUST00000205090 728 ntBASIC3.74□□□□□ -1.81
RpainQ9CWY9 Mir32-201ENSMUST00000083610 70 ntBASIC3.74□□□□□ -1.81
RpainQ9CWY9 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.74□□□□□ -1.81
RpainQ9CWY9 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RpainQ9CWY9 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
RpainQ9CWY9 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm12797-201ENSMUST00000118645 273 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm11693-201ENSMUST00000119625 565 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm11785-201ENSMUST00000120165 601 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm13581-201ENSMUST00000120675 278 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm23184-201ENSMUST00000122594 131 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm24392-201ENSMUST00000158136 103 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm22840-201ENSMUST00000158444 136 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm22890-201ENSMUST00000158642 144 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm24667-201ENSMUST00000158938 103 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm24264-201ENSMUST00000179835 94 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm27465-201ENSMUST00000184290 91 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm27392-201ENSMUST00000185041 101 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm37162-201ENSMUST00000191708 551 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm44922-201ENSMUST00000206690 90 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.73□□□□□ -1.81
RpainQ9CWY9 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.73□□□□□ -1.81
RpainQ9CWY9 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RpainQ9CWY9 Gm22936-201ENSMUST00000103955 126 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Gm25764-201ENSMUST00000104092 134 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Gm24890-201ENSMUST00000104389 102 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Gm25727-201ENSMUST00000104522 131 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Gm15613-201ENSMUST00000118396 326 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Gm14770-201ENSMUST00000122197 312 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RpainQ9CWY9 Gm22792-201ENSMUST00000157225 133 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Gm25392-201ENSMUST00000157335 297 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Gm23716-201ENSMUST00000157348 144 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Gm25914-201ENSMUST00000157618 153 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Gm37343-201ENSMUST00000192542 111 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Gm42578-201ENSMUST00000199960 194 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.72□□□□□ -1.81
RpainQ9CWY9 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
RpainQ9CWY9 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.72□□□□□ -1.81
RpainQ9CWY9 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
RpainQ9CWY9 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RpainQ9CWY9 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
RpainQ9CWY9 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
RpainQ9CWY9 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm24403-201ENSMUST00000104616 130 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm14845-201ENSMUST00000121259 306 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm26476-201ENSMUST00000122618 313 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm24006-201ENSMUST00000158462 132 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm20651-201ENSMUST00000177219 329 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm28148-201ENSMUST00000186924 697 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm29429-201ENSMUST00000187071 121 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.71□□□□□ -1.82
RpainQ9CWY9 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RpainQ9CWY9 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm18213-201ENSMUST00000207850 178 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.71□□□□□ -1.82
RpainQ9CWY9 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RpainQ9CWY9 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RpainQ9CWY9 Snora7a-201ENSMUST00000082629 140 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm22806-201ENSMUST00000082738 136 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm25698-201ENSMUST00000082897 107 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm22828-201ENSMUST00000083768 107 ntBASIC3.71□□□□□ -1.82
RpainQ9CWY9 Gm22353-201ENSMUST00000083918 136 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 132.9 ms