Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm44609-201ENSMUST00000207157 460 ntBASIC1.47□□□□□ -2.17
Rpa3Q9CQ71 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.47□□□□□ -2.17
Rpa3Q9CQ71 Mir29c-201ENSMUST00000083614 88 ntBASIC1.47□□□□□ -2.17
Rpa3Q9CQ71 Gm23848-201ENSMUST00000083826 106 ntBASIC1.47□□□□□ -2.17
Rpa3Q9CQ71 Gm25832-201ENSMUST00000104140 130 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm25421-201ENSMUST00000104218 164 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm13378-201ENSMUST00000117483 336 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm15162-201ENSMUST00000119325 283 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm6587-201ENSMUST00000120219 613 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm14530-201ENSMUST00000122391 333 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm24902-201ENSMUST00000158126 123 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm24076-201ENSMUST00000158179 94 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm24348-201ENSMUST00000158710 130 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm8114-201ENSMUST00000172225 484 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm25156-201ENSMUST00000179809 79 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Mir6399-201ENSMUST00000184050 84 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm27493-201ENSMUST00000184128 78 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm9236-201ENSMUST00000196892 587 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Mir3068-202ENSMUST00000197755 79 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm18242-201ENSMUST00000218455 542 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm24805-201ENSMUST00000082931 104 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm10360-201ENSMUST00000097219 272 ntBASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Rpa3Q9CQ71 Gm23202-201ENSMUST00000104376 129 ntBASIC1.45□□□□□ -2.18
Rpa3Q9CQ71 Gm14215-201ENSMUST00000120578 221 ntBASIC1.45□□□□□ -2.18
Rpa3Q9CQ71 Mir1942-201ENSMUST00000157274 63 ntBASIC1.45□□□□□ -2.18
Rpa3Q9CQ71 Gm22186-201ENSMUST00000157822 122 ntBASIC1.45□□□□□ -2.18
Rpa3Q9CQ71 Gm24551-201ENSMUST00000158645 92 ntBASIC1.45□□□□□ -2.18
Rpa3Q9CQ71 Gm2966-201ENSMUST00000166052 481 ntBASIC1.45□□□□□ -2.18
Rpa3Q9CQ71 Gm23289-201ENSMUST00000175615 108 ntBASIC1.45□□□□□ -2.18
Rpa3Q9CQ71 Gm25020-201ENSMUST00000178071 107 ntBASIC1.45□□□□□ -2.18
Rpa3Q9CQ71 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.45□□□□□ -2.18
Rpa3Q9CQ71 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.45□□□□□ -2.18
Rpa3Q9CQ71 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.45□□□□□ -2.18
Rpa3Q9CQ71 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.45□□□□□ -2.18
Rpa3Q9CQ71 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Rpa3Q9CQ71 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Rpa3Q9CQ71 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Gm23011-201ENSMUST00000104148 132 ntBASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Gm26049-201ENSMUST00000157313 108 ntBASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Gm27396-201ENSMUST00000157708 58 ntBASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Gm16162-201ENSMUST00000162296 297 ntBASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Gm24333-201ENSMUST00000175101 84 ntBASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Gm24713-201ENSMUST00000178850 107 ntBASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Gm25448-201ENSMUST00000180065 107 ntBASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Gm28439-201ENSMUST00000187714 876 ntBASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Gm33866-201ENSMUST00000196911 289 ntBASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Gm44384-201ENSMUST00000200208 114 ntBASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Gm46103-201ENSMUST00000217614 341 ntBASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.44□□□□□ -2.18
Rpa3Q9CQ71 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 Gm22217-201ENSMUST00000157556 313 ntBASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 Gm23181-201ENSMUST00000158685 110 ntBASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 Snord87-201ENSMUST00000175437 87 ntBASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 Gm27588-201ENSMUST00000185096 263 ntBASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 Olfr1285-201ENSMUST00000208523 903 ntBASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 Gm23517-201ENSMUST00000082830 192 ntBASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Rpa3Q9CQ71 Gm12309-201ENSMUST00000119889 182 ntBASIC1.42□□□□□ -2.18
Rpa3Q9CQ71 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.42□□□□□ -2.18
Rpa3Q9CQ71 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.42□□□□□ -2.18
Rpa3Q9CQ71 Gm16129-201ENSMUST00000152628 486 ntBASIC1.42□□□□□ -2.18
Rpa3Q9CQ71 Mir3086-201ENSMUST00000175072 87 ntBASIC1.42□□□□□ -2.18
Rpa3Q9CQ71 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.42□□□□□ -2.18
Rpa3Q9CQ71 Gm28151-201ENSMUST00000189404 951 ntBASIC1.42□□□□□ -2.18
Rpa3Q9CQ71 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.42□□□□□ -2.18
Rpa3Q9CQ71 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.42□□□□□ -2.18
Rpa3Q9CQ71 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Rpa3Q9CQ71 Gm26328-201ENSMUST00000082821 107 ntBASIC1.42□□□□□ -2.18
Rpa3Q9CQ71 Gm26265-201ENSMUST00000083277 135 ntBASIC1.42□□□□□ -2.18
Rpa3Q9CQ71 Gm25794-201ENSMUST00000083286 107 ntBASIC1.42□□□□□ -2.18
Rpa3Q9CQ71 Gm23454-201ENSMUST00000083332 133 ntBASIC1.42□□□□□ -2.18
Rpa3Q9CQ71 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Rpa3Q9CQ71 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.41□□□□□ -2.18
Rpa3Q9CQ71 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 213.8 ms