Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm19202-201ENSMUST00000198096 808 ntBASIC3.35□□□□□ -1.87
Pcdha9Q91Y11 Gm19177-201ENSMUST00000204520 613 ntBASIC3.35□□□□□ -1.87
Pcdha9Q91Y11 Gm44157-201ENSMUST00000204720 410 ntBASIC3.35□□□□□ -1.87
Pcdha9Q91Y11 Gm45005-201ENSMUST00000206640 157 ntBASIC3.35□□□□□ -1.87
Pcdha9Q91Y11 Gm9377-201ENSMUST00000207227 623 ntBASIC3.35□□□□□ -1.87
Pcdha9Q91Y11 AC165092.3-201ENSMUST00000223602 282 ntBASIC3.35□□□□□ -1.87
Pcdha9Q91Y11 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.35□□□□□ -1.87
Pcdha9Q91Y11 Gm22997-201ENSMUST00000082845 107 ntBASIC3.35□□□□□ -1.87
Pcdha9Q91Y11 Gm22970-201ENSMUST00000083304 186 ntBASIC3.35□□□□□ -1.87
Pcdha9Q91Y11 Gm23041-201ENSMUST00000083868 106 ntBASIC3.35□□□□□ -1.87
Pcdha9Q91Y11 Gm26329-201ENSMUST00000093723 110 ntBASIC3.35□□□□□ -1.87
Pcdha9Q91Y11 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Pcdha9Q91Y11 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.35□□□□□ -1.87
Pcdha9Q91Y11 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Mir673-201ENSMUST00000102361 91 ntBASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Gm12647-201ENSMUST00000118977 265 ntBASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Gm23713-201ENSMUST00000157353 70 ntBASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Gm22615-201ENSMUST00000158102 70 ntBASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Gm24005-201ENSMUST00000158459 296 ntBASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Gm18520-201ENSMUST00000174783 658 ntBASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Gm27869-201ENSMUST00000184327 122 ntBASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Mir6371-201ENSMUST00000184470 111 ntBASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Gm32222-201ENSMUST00000203296 298 ntBASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Gm23055-201ENSMUST00000082805 94 ntBASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Gm22739-201ENSMUST00000083437 160 ntBASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Pcdha9Q91Y11 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Pcdha9Q91Y11 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.34□□□□□ -1.88
Pcdha9Q91Y11 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Pcdha9Q91Y11 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm22115-201ENSMUST00000103976 133 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm23923-201ENSMUST00000104108 133 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm13725-201ENSMUST00000122139 207 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm22654-201ENSMUST00000157874 105 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm24730-201ENSMUST00000158228 117 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm22113-201ENSMUST00000158343 104 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm5967-201ENSMUST00000172723 494 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm25956-201ENSMUST00000175115 217 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm29147-201ENSMUST00000186846 315 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm29227-201ENSMUST00000187139 315 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm29034-201ENSMUST00000188099 315 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm28160-201ENSMUST00000191229 315 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm1833-201ENSMUST00000191608 682 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm37129-201ENSMUST00000195791 315 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm23370-202ENSMUST00000197008 129 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 AC160115.1-201ENSMUST00000224678 1574 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.33□□□□□ -1.88
Pcdha9Q91Y11 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm9850-201ENSMUST00000117916 227 ntBASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm13355-201ENSMUST00000117996 317 ntBASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm13541-201ENSMUST00000119519 283 ntBASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm12956-201ENSMUST00000122184 414 ntBASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm24213-201ENSMUST00000158255 258 ntBASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Mir5136-201ENSMUST00000175573 76 ntBASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm17522-201ENSMUST00000178144 498 ntBASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm27760-201ENSMUST00000185048 114 ntBASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm43600-201ENSMUST00000202134 223 ntBASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Snord14d-201ENSMUST00000083424 86 ntBASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm23845-201ENSMUST00000083834 152 ntBASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm24522-201ENSMUST00000083964 108 ntBASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.32□□□□□ -1.88
Pcdha9Q91Y11 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.31□□□□□ -1.88
Pcdha9Q91Y11 Gm23586-201ENSMUST00000157657 123 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 163.3 ms