Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm26240-201ENSMUST00000101893 105 ntBASIC3.62□□□□□ -1.83
Brf1Q8CFK2 Gm23941-201ENSMUST00000101953 107 ntBASIC3.62□□□□□ -1.83
Brf1Q8CFK2 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Brf1Q8CFK2 Gm13672-201ENSMUST00000117554 459 ntBASIC3.62□□□□□ -1.83
Brf1Q8CFK2 Gm9850-201ENSMUST00000117916 227 ntBASIC3.62□□□□□ -1.83
Brf1Q8CFK2 Gm11388-201ENSMUST00000120908 159 ntBASIC3.62□□□□□ -1.83
Brf1Q8CFK2 Gm14845-201ENSMUST00000121259 306 ntBASIC3.62□□□□□ -1.83
Brf1Q8CFK2 Gm22961-201ENSMUST00000157964 106 ntBASIC3.62□□□□□ -1.83
Brf1Q8CFK2 Gm23704-201ENSMUST00000158844 340 ntBASIC3.62□□□□□ -1.83
Brf1Q8CFK2 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Brf1Q8CFK2 Gm29452-201ENSMUST00000187996 313 ntBASIC3.62□□□□□ -1.83
Brf1Q8CFK2 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.62□□□□□ -1.83
Brf1Q8CFK2 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.62□□□□□ -1.83
Brf1Q8CFK2 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.62□□□□□ -1.83
Brf1Q8CFK2 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.62□□□□□ -1.83
Brf1Q8CFK2 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Brf1Q8CFK2 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Gm22779-201ENSMUST00000104085 107 ntBASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Gm25107-201ENSMUST00000122472 129 ntBASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Gm25054-201ENSMUST00000157370 97 ntBASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Gm22113-201ENSMUST00000158343 104 ntBASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Gm25362-201ENSMUST00000158854 105 ntBASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Gm28629-201ENSMUST00000187309 263 ntBASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Gm7871-201ENSMUST00000195346 618 ntBASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Gm19177-201ENSMUST00000204520 613 ntBASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Gm46233-201ENSMUST00000217831 449 ntBASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Gm9370-201ENSMUST00000222787 609 ntBASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Gm26166-201ENSMUST00000083788 107 ntBASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Gm37096-201ENSMUST00000192317 2058 ntBASIC3.61□□□□□ -1.83
Brf1Q8CFK2 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Gm12897-201ENSMUST00000120341 250 ntBASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Gm22322-201ENSMUST00000157151 111 ntBASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Gm24005-201ENSMUST00000158459 296 ntBASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Gm23196-201ENSMUST00000158806 107 ntBASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Gm25198-201ENSMUST00000178574 110 ntBASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Gm26585-201ENSMUST00000180890 630 ntBASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Mir7578-201ENSMUST00000183455 82 ntBASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Gm28257-201ENSMUST00000185244 463 ntBASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Gm19202-201ENSMUST00000198096 808 ntBASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Gm45313-201ENSMUST00000210584 178 ntBASIC3.6□□□□□ -1.83
Brf1Q8CFK2 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.6□□□□□ -1.83
Brf1Q8CFK2 AC165092.3-201ENSMUST00000223602 282 ntBASIC3.6□□□□□ -1.83
Brf1Q8CFK2 AL606472.1-201ENSMUST00000224628 275 ntBASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Brf1Q8CFK2 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Brf1Q8CFK2 AC160115.1-201ENSMUST00000224678 1574 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm25943-201ENSMUST00000103791 90 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Mir466b-7-201ENSMUST00000103804 88 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Mir466b-8-201ENSMUST00000103883 86 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Mir466b-5-201ENSMUST00000103900 88 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm12647-201ENSMUST00000118977 265 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm23759-201ENSMUST00000158351 268 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm16289-201ENSMUST00000162079 183 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm20542-201ENSMUST00000174582 372 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Mir5123-201ENSMUST00000177794 83 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Mir466b-4-201ENSMUST00000178801 90 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm25285-201ENSMUST00000178951 90 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Mir466b-6-201ENSMUST00000180061 90 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Mir466c-2-201ENSMUST00000180211 90 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Mir466e-201ENSMUST00000198862 84 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm43217-201ENSMUST00000199513 367 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Mir466c-1-201ENSMUST00000200654 84 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm45005-201ENSMUST00000206640 157 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm45678-201ENSMUST00000210509 295 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm8940-201ENSMUST00000212585 219 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm23517-201ENSMUST00000082830 192 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm23297-201ENSMUST00000083184 127 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm26329-201ENSMUST00000093723 110 ntBASIC3.59□□□□□ -1.83
Brf1Q8CFK2 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 197.7 ms