Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC4□□□□□ -1.77
Ubp1Q811S7 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4□□□□□ -1.77
Ubp1Q811S7 Gm45778-201ENSMUST00000211959 153 ntBASIC4□□□□□ -1.77
Ubp1Q811S7 AC122484.1-201ENSMUST00000221578 177 ntBASIC4□□□□□ -1.77
Ubp1Q811S7 AC124746.2-201ENSMUST00000226594 427 ntBASIC4□□□□□ -1.77
Ubp1Q811S7 Gm26204-201ENSMUST00000082906 107 ntBASIC4□□□□□ -1.77
Ubp1Q811S7 Gm45039-201ENSMUST00000209181 3477 ntBASIC4□□□□□ -1.77
Ubp1Q811S7 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ubp1Q811S7 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ubp1Q811S7 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4□□□□□ -1.77
Ubp1Q811S7 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ubp1Q811S7 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ubp1Q811S7 Mir551b-201ENSMUST00000102165 98 ntBASIC3.99□□□□□ -1.77
Ubp1Q811S7 Snord66-201ENSMUST00000104051 75 ntBASIC3.99□□□□□ -1.77
Ubp1Q811S7 Gm22493-201ENSMUST00000104494 132 ntBASIC3.99□□□□□ -1.77
Ubp1Q811S7 Gm14473-201ENSMUST00000122269 557 ntBASIC3.99□□□□□ -1.77
Ubp1Q811S7 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.99□□□□□ -1.77
Ubp1Q811S7 Gm25386-201ENSMUST00000157814 288 ntBASIC3.99□□□□□ -1.77
Ubp1Q811S7 Gm24898-201ENSMUST00000158133 106 ntBASIC3.99□□□□□ -1.77
Ubp1Q811S7 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC3.99□□□□□ -1.77
Ubp1Q811S7 Gm29005-201ENSMUST00000186773 320 ntBASIC3.99□□□□□ -1.77
Ubp1Q811S7 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ubp1Q811S7 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.99□□□□□ -1.77
Ubp1Q811S7 Gm43193-201ENSMUST00000197732 441 ntBASIC3.99□□□□□ -1.77
Ubp1Q811S7 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.99□□□□□ -1.77
Ubp1Q811S7 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.99□□□□□ -1.77
Ubp1Q811S7 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.99□□□□□ -1.77
Ubp1Q811S7 Gm25581-201ENSMUST00000083410 164 ntBASIC3.99□□□□□ -1.77
Ubp1Q811S7 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.99□□□□□ -1.77
Ubp1Q811S7 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.99□□□□□ -1.77
Ubp1Q811S7 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ubp1Q811S7 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
Ubp1Q811S7 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.98□□□□□ -1.77
Ubp1Q811S7 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ubp1Q811S7 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ubp1Q811S7 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ubp1Q811S7 Gm23322-201ENSMUST00000104464 167 ntBASIC3.98□□□□□ -1.77
Ubp1Q811S7 Gm22613-201ENSMUST00000122679 292 ntBASIC3.98□□□□□ -1.77
Ubp1Q811S7 Gm5963-201ENSMUST00000143451 236 ntBASIC3.98□□□□□ -1.77
Ubp1Q811S7 Gm24908-201ENSMUST00000157294 127 ntBASIC3.98□□□□□ -1.77
Ubp1Q811S7 Gm37290-201ENSMUST00000195775 339 ntBASIC3.98□□□□□ -1.77
Ubp1Q811S7 Gm44354-201ENSMUST00000196017 143 ntBASIC3.98□□□□□ -1.77
Ubp1Q811S7 Gm43746-201ENSMUST00000200028 317 ntBASIC3.98□□□□□ -1.77
Ubp1Q811S7 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.98□□□□□ -1.77
Ubp1Q811S7 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.98□□□□□ -1.77
Ubp1Q811S7 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ubp1Q811S7 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ubp1Q811S7 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ubp1Q811S7 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ubp1Q811S7 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ubp1Q811S7 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ubp1Q811S7 Gm23492-201ENSMUST00000116837 115 ntBASIC3.97□□□□□ -1.77
Ubp1Q811S7 Gm14073-201ENSMUST00000117344 381 ntBASIC3.97□□□□□ -1.77
Ubp1Q811S7 Gm24053-201ENSMUST00000158620 105 ntBASIC3.97□□□□□ -1.77
Ubp1Q811S7 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.97□□□□□ -1.77
Ubp1Q811S7 Gm19898-201ENSMUST00000177490 251 ntBASIC3.97□□□□□ -1.77
Ubp1Q811S7 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.97□□□□□ -1.77
Ubp1Q811S7 Gm20144-201ENSMUST00000203031 165 ntBASIC3.97□□□□□ -1.77
Ubp1Q811S7 Gm5002-201ENSMUST00000207145 223 ntBASIC3.97□□□□□ -1.77
Ubp1Q811S7 Gm44563-201ENSMUST00000207958 178 ntBASIC3.97□□□□□ -1.77
Ubp1Q811S7 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.97□□□□□ -1.77
Ubp1Q811S7 Gm46998-201ENSMUST00000221444 330 ntBASIC3.97□□□□□ -1.77
Ubp1Q811S7 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.97□□□□□ -1.77
Ubp1Q811S7 AC165138.1-201ENSMUST00000226984 270 ntBASIC3.97□□□□□ -1.77
Ubp1Q811S7 Gm22978-201ENSMUST00000082607 160 ntBASIC3.97□□□□□ -1.77
Ubp1Q811S7 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.97□□□□□ -1.77
Ubp1Q811S7 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ubp1Q811S7 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ubp1Q811S7 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ubp1Q811S7 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ubp1Q811S7 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.97□□□□□ -1.77
Ubp1Q811S7 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ubp1Q811S7 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ubp1Q811S7 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Ubp1Q811S7 Gm24067-201ENSMUST00000104514 85 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Gm22713-201ENSMUST00000116895 130 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Gm7618-201ENSMUST00000121643 171 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Gm11281-201ENSMUST00000141391 576 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Gm22989-201ENSMUST00000158313 86 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Gm22398-201ENSMUST00000174941 125 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Gm22192-201ENSMUST00000175128 85 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Gm25731-201ENSMUST00000175167 125 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Mir6402-201ENSMUST00000183406 80 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Gm27695-201ENSMUST00000184301 91 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Mir6899-201ENSMUST00000184798 64 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Gm43853-201ENSMUST00000197162 301 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Mir1a-2-201ENSMUST00000198520 72 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Gm17887-201ENSMUST00000200194 547 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Gm44650-201ENSMUST00000206929 194 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Gm35857-201ENSMUST00000212739 178 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Gm5548-201ENSMUST00000055878 397 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Gm25632-201ENSMUST00000083112 85 ntBASIC3.96□□□□□ -1.78
Ubp1Q811S7 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ubp1Q811S7 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Ubp1Q811S7 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Ubp1Q811S7 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ubp1Q811S7 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 178.8 ms