Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Gm25243-201ENSMUST00000174912 207 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Mir6901-201ENSMUST00000185062 62 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Gm28755-201ENSMUST00000185773 199 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Gm7858-201ENSMUST00000190177 622 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Gm28951-201ENSMUST00000190742 313 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Gm37455-201ENSMUST00000191993 529 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Gm37081-201ENSMUST00000192034 196 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Gm32033-201ENSMUST00000193483 339 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Trbv24-201ENSMUST00000194614 347 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Gm19140-201ENSMUST00000209790 421 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.51□□□□□ -2.01
Trim58Q5NCC9 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 AC116465.1-201ENSMUST00000220324 235 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Mir743b-201ENSMUST00000104751 77 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm11386-201ENSMUST00000117761 347 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm12941-201ENSMUST00000117934 220 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm15223-201ENSMUST00000120989 826 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm12779-201ENSMUST00000121496 143 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm22080-201ENSMUST00000157591 106 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm23016-201ENSMUST00000158431 62 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm24810-201ENSMUST00000175317 70 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm27979-201ENSMUST00000185126 56 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm28779-201ENSMUST00000189678 323 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm6059-201ENSMUST00000196903 340 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm44465-201ENSMUST00000199536 114 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm43884-201ENSMUST00000204251 559 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm43955-201ENSMUST00000204332 142 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm34783-201ENSMUST00000209159 303 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Gm3867-201ENSMUST00000086108 279 ntBASIC2.5□□□□□ -2.01
Trim58Q5NCC9 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.5□□□□□ -2.01
Trim58Q5NCC9 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm13424-201ENSMUST00000122301 354 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm23000-201ENSMUST00000157083 139 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm25220-201ENSMUST00000157546 95 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm19932-201ENSMUST00000177033 313 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm7837-201ENSMUST00000190873 412 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm43007-201ENSMUST00000197618 291 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm18696-201ENSMUST00000220103 274 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm23627-201ENSMUST00000082459 107 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm22247-201ENSMUST00000082476 131 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm22502-201ENSMUST00000082488 107 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm22977-201ENSMUST00000082615 107 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm24149-201ENSMUST00000082757 107 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm24044-201ENSMUST00000083107 156 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Gm25579-201ENSMUST00000083407 106 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.49□□□□□ -2.01
Trim58Q5NCC9 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Trim58Q5NCC9 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm12255-201ENSMUST00000117184 284 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm13541-201ENSMUST00000119519 283 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm23867-201ENSMUST00000122649 274 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm16218-201ENSMUST00000155424 388 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm22560-201ENSMUST00000157332 120 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm24959-201ENSMUST00000157924 146 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm23411-201ENSMUST00000157988 62 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm8532-201ENSMUST00000179174 461 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Mir7093-201ENSMUST00000184195 101 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm29350-201ENSMUST00000189141 541 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm43976-201ENSMUST00000203637 235 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm44687-201ENSMUST00000204975 235 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm44938-201ENSMUST00000208614 427 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim58Q5NCC9 Gm45402-201ENSMUST00000211796 223 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 AC147101.1-201ENSMUST00000217964 312 ntBASIC2.48□□□□□ -2.01
Trim58Q5NCC9 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 167 ms