Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm27753-201ENSMUST00000184742 203 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm28356-202ENSMUST00000187566 858 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm20885-201ENSMUST00000190192 654 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm37455-201ENSMUST00000191993 529 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm36866-201ENSMUST00000193343 657 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm36047-201ENSMUST00000193659 657 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm20857-201ENSMUST00000194766 657 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm20858-201ENSMUST00000195459 657 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Mir6925-201ENSMUST00000197857 70 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm8940-201ENSMUST00000212585 219 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 AC192333.2-201ENSMUST00000224771 196 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Olfr197-201ENSMUST00000080031 926 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm25859-201ENSMUST00000083710 91 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.06
Trim3Q9R1R2 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Gm12765-201ENSMUST00000117273 615 ntBASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Gm13331-201ENSMUST00000117500 448 ntBASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Gm15183-201ENSMUST00000118933 348 ntBASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Gm25961-201ENSMUST00000157174 135 ntBASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Gm24997-201ENSMUST00000157910 105 ntBASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Gm20689-201ENSMUST00000176033 279 ntBASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Gm23963-201ENSMUST00000179603 77 ntBASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Gm28627-201ENSMUST00000186141 453 ntBASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Trbv7-201ENSMUST00000193339 402 ntBASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Gm8747-201ENSMUST00000195392 751 ntBASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Gm45252-201ENSMUST00000211579 397 ntBASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Gm24044-201ENSMUST00000083107 156 ntBASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.15□□□□□ -2.07
Trim3Q9R1R2 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm15844-201ENSMUST00000118016 576 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm14652-201ENSMUST00000118479 235 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm7916-201ENSMUST00000120325 456 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm12779-201ENSMUST00000121496 143 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm22517-201ENSMUST00000158265 136 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm23005-201ENSMUST00000158950 136 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Mir7068-201ENSMUST00000183439 74 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Mir6370-201ENSMUST00000183510 120 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm38261-201ENSMUST00000192608 316 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm37658-201ENSMUST00000192672 315 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm37550-201ENSMUST00000193230 463 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm42925-201ENSMUST00000197359 285 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm44256-201ENSMUST00000203304 335 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm44459-201ENSMUST00000203926 160 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.14□□□□□ -2.07
Trim3Q9R1R2 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm19441-201ENSMUST00000221545 330 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm22443-201ENSMUST00000082890 107 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm23093-201ENSMUST00000083450 102 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Mir10a-201ENSMUST00000083585 110 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trim3Q9R1R2 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm14748-201ENSMUST00000119819 411 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm16510-201ENSMUST00000153501 249 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm26280-201ENSMUST00000157096 101 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm22793-201ENSMUST00000157227 330 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm23713-201ENSMUST00000157353 70 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm23324-201ENSMUST00000157421 131 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm25910-201ENSMUST00000157620 140 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm22615-201ENSMUST00000158102 70 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm17072-201ENSMUST00000166673 658 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm26622-201ENSMUST00000180520 298 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm8151-201ENSMUST00000184817 871 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm2719-201ENSMUST00000191929 444 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm9236-201ENSMUST00000196892 587 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm43529-201ENSMUST00000199178 412 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 AL772265.1-201ENSMUST00000214379 305 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.13□□□□□ -2.07
Trim3Q9R1R2 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.13□□□□□ -2.07
Trim3Q9R1R2 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trim3Q9R1R2 Gm24313-201ENSMUST00000082561 133 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 179.6 ms