Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ubp1Q811S7 Gm6829-201ENSMUST00000119858 360 ntBASIC4.04□□□□□ -1.76
Ubp1Q811S7 Gm25177-201ENSMUST00000122634 117 ntBASIC4.04□□□□□ -1.76
Ubp1Q811S7 Gm22277-201ENSMUST00000157204 277 ntBASIC4.04□□□□□ -1.76
Ubp1Q811S7 Gm17159-201ENSMUST00000169043 482 ntBASIC4.04□□□□□ -1.76
Ubp1Q811S7 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ubp1Q811S7 Gm23933-201ENSMUST00000178405 79 ntBASIC4.04□□□□□ -1.76
Ubp1Q811S7 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ubp1Q811S7 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.04□□□□□ -1.76
Ubp1Q811S7 Gm21960-201ENSMUST00000181924 452 ntBASIC4.04□□□□□ -1.76
Ubp1Q811S7 Mir7667-201ENSMUST00000183866 63 ntBASIC4.04□□□□□ -1.76
Ubp1Q811S7 Gm20058-201ENSMUST00000186939 284 ntBASIC4.04□□□□□ -1.76
Ubp1Q811S7 Mir5121-201ENSMUST00000198528 74 ntBASIC4.04□□□□□ -1.76
Ubp1Q811S7 Gm43730-201ENSMUST00000199863 372 ntBASIC4.04□□□□□ -1.76
Ubp1Q811S7 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ubp1Q811S7 Gm23039-201ENSMUST00000083870 161 ntBASIC4.04□□□□□ -1.76
Ubp1Q811S7 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.04□□□□□ -1.76
Ubp1Q811S7 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ubp1Q811S7 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ubp1Q811S7 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ubp1Q811S7 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.04□□□□□ -1.76
Ubp1Q811S7 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ubp1Q811S7 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ubp1Q811S7 Gm23481-201ENSMUST00000104173 131 ntBASIC4.03□□□□□ -1.76
Ubp1Q811S7 Gm25421-201ENSMUST00000104218 164 ntBASIC4.03□□□□□ -1.76
Ubp1Q811S7 Gm24132-201ENSMUST00000104745 91 ntBASIC4.03□□□□□ -1.76
Ubp1Q811S7 Gm14448-201ENSMUST00000116383 210 ntBASIC4.03□□□□□ -1.76
Ubp1Q811S7 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC4.03□□□□□ -1.76
Ubp1Q811S7 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.03□□□□□ -1.76
Ubp1Q811S7 Gm22767-201ENSMUST00000158365 165 ntBASIC4.03□□□□□ -1.76
Ubp1Q811S7 Gm25051-201ENSMUST00000158602 249 ntBASIC4.03□□□□□ -1.76
Ubp1Q811S7 Gm4468-201ENSMUST00000170206 294 ntBASIC4.03□□□□□ -1.76
Ubp1Q811S7 Gm21827-201ENSMUST00000178247 423 ntBASIC4.03□□□□□ -1.76
Ubp1Q811S7 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.03□□□□□ -1.76
Ubp1Q811S7 Gm27585-201ENSMUST00000183717 199 ntBASIC4.03□□□□□ -1.76
Ubp1Q811S7 Mir6996-201ENSMUST00000183922 61 ntBASIC4.03□□□□□ -1.76
Ubp1Q811S7 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.03□□□□□ -1.76
Ubp1Q811S7 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ubp1Q811S7 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ubp1Q811S7 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Ubp1Q811S7 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Ubp1Q811S7 Gm44842-201ENSMUST00000209173 3372 ntBASIC4.02□□□□□ -1.77
Ubp1Q811S7 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ubp1Q811S7 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ubp1Q811S7 Gm23319-201ENSMUST00000104467 131 ntBASIC4.02□□□□□ -1.77
Ubp1Q811S7 Gm12722-201ENSMUST00000118507 493 ntBASIC4.02□□□□□ -1.77
Ubp1Q811S7 Gm22337-201ENSMUST00000157721 132 ntBASIC4.02□□□□□ -1.77
Ubp1Q811S7 Gm23554-201ENSMUST00000157818 110 ntBASIC4.02□□□□□ -1.77
Ubp1Q811S7 Gm7592-201ENSMUST00000160674 627 ntBASIC4.02□□□□□ -1.77
Ubp1Q811S7 Gm7582-201ENSMUST00000160831 603 ntBASIC4.02□□□□□ -1.77
Ubp1Q811S7 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.02□□□□□ -1.77
Ubp1Q811S7 Gm24811-201ENSMUST00000175313 100 ntBASIC4.02□□□□□ -1.77
Ubp1Q811S7 Mir7074-201ENSMUST00000183884 63 ntBASIC4.02□□□□□ -1.77
Ubp1Q811S7 Gm37624-201ENSMUST00000193751 219 ntBASIC4.02□□□□□ -1.77
Ubp1Q811S7 AC154296.1-201ENSMUST00000198150 67 ntBASIC4.02□□□□□ -1.77
Ubp1Q811S7 Gm43651-201ENSMUST00000199796 439 ntBASIC4.02□□□□□ -1.77
Ubp1Q811S7 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC4.02□□□□□ -1.77
Ubp1Q811S7 AC098718.2-201ENSMUST00000226822 285 ntBASIC4.02□□□□□ -1.77
Ubp1Q811S7 Gm22299-201ENSMUST00000082663 136 ntBASIC4.02□□□□□ -1.77
Ubp1Q811S7 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ubp1Q811S7 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ubp1Q811S7 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ubp1Q811S7 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ubp1Q811S7 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Ubp1Q811S7 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ubp1Q811S7 Gm24125-201ENSMUST00000104105 137 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Gm12512-201ENSMUST00000119620 217 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Gm12304-201ENSMUST00000120312 385 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Gm25104-201ENSMUST00000122476 163 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Gm22097-201ENSMUST00000157929 278 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Gm24878-201ENSMUST00000158782 104 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Gm23571-201ENSMUST00000180073 127 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Gm37300-201ENSMUST00000193327 280 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ubp1Q811S7 Gm44376-201ENSMUST00000197570 128 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Gm45006-201ENSMUST00000206078 690 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Gm18188-201ENSMUST00000219386 478 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Mir28a-201ENSMUST00000083560 86 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Gm24163-201ENSMUST00000093660 132 ntBASIC4.01□□□□□ -1.77
Ubp1Q811S7 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ubp1Q811S7 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ubp1Q811S7 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Ubp1Q811S7 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
Ubp1Q811S7 AC153526.2-201ENSMUST00000218206 2031 ntBASIC4□□□□□ -1.77
Ubp1Q811S7 Gm43875-201ENSMUST00000203319 2475 ntBASIC4□□□□□ -1.77
Ubp1Q811S7 Gm43705-201ENSMUST00000195958 3717 ntBASIC4□□□□□ -1.77
Ubp1Q811S7 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ubp1Q811S7 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ubp1Q811S7 Gm13478-201ENSMUST00000118312 413 ntBASIC4□□□□□ -1.77
Ubp1Q811S7 Gm15120-201ENSMUST00000120602 301 ntBASIC4□□□□□ -1.77
Ubp1Q811S7 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4□□□□□ -1.77
Ubp1Q811S7 Ear-ps8-201ENSMUST00000161935 354 ntBASIC4□□□□□ -1.77
Ubp1Q811S7 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC4□□□□□ -1.77
Ubp1Q811S7 Gm8790-201ENSMUST00000194108 322 ntBASIC4□□□□□ -1.77
Ubp1Q811S7 Trbv18-201ENSMUST00000194256 294 ntBASIC4□□□□□ -1.77
Ubp1Q811S7 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 134.9 ms