Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm26335-201ENSMUST00000178449 107 ntBASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm26968-201ENSMUST00000182894 481 ntBASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.56□□□□□ -2
Trim58Q5NCC9 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm27385-201ENSMUST00000184747 104 ntBASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm6060-201ENSMUST00000188671 251 ntBASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm5034-201ENSMUST00000199115 634 ntBASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm5001-201ENSMUST00000204361 331 ntBASIC2.56□□□□□ -2
Trim58Q5NCC9 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trim58Q5NCC9 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trim58Q5NCC9 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm26446-201ENSMUST00000082455 103 ntBASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm381-201ENSMUST00000117443 2037 ntBASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm24098-201ENSMUST00000102075 109 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Gm25381-201ENSMUST00000102078 109 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Gm26345-201ENSMUST00000157534 120 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Gm24168-201ENSMUST00000178825 107 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Gm9892-201ENSMUST00000182415 992 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Gm27443-201ENSMUST00000184660 98 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.55□□□□□ -2
Trim58Q5NCC9 Gm38109-201ENSMUST00000195386 181 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Gm18341-201ENSMUST00000197538 622 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Gm7039-201ENSMUST00000205138 346 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Gm44966-201ENSMUST00000208096 157 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Gm18854-201ENSMUST00000211196 329 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim58Q5NCC9 Gm30155-201ENSMUST00000223458 339 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trim58Q5NCC9 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trim58Q5NCC9 Gm25135-201ENSMUST00000082648 143 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim58Q5NCC9 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.55□□□□□ -2
Trim58Q5NCC9 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim58Q5NCC9 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim58Q5NCC9 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trim58Q5NCC9 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm22834-201ENSMUST00000102021 79 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm22496-201ENSMUST00000104493 88 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Mir344e-201ENSMUST00000104677 66 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 AA413626-201ENSMUST00000121125 494 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm25624-201ENSMUST00000157222 275 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm22727-201ENSMUST00000158090 116 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm25488-201ENSMUST00000158728 118 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm18588-201ENSMUST00000177308 492 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm25175-201ENSMUST00000178712 79 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm37743-201ENSMUST00000194645 376 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Mir7217-201ENSMUST00000200304 62 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm29809-201ENSMUST00000218423 493 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm20102-201ENSMUST00000222445 220 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.54□□□□□ -2
Trim58Q5NCC9 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.54□□□□□ -2
Trim58Q5NCC9 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.54□□□□□ -2
Trim58Q5NCC9 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trim58Q5NCC9 Gm22831-201ENSMUST00000102473 109 ntBASIC2.53□□□□□ -2
Trim58Q5NCC9 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trim58Q5NCC9 Gm22936-201ENSMUST00000103955 126 ntBASIC2.53□□□□□ -2
Trim58Q5NCC9 Gm11512-201ENSMUST00000119669 663 ntBASIC2.53□□□□□ -2
Trim58Q5NCC9 Gm16289-201ENSMUST00000162079 183 ntBASIC2.53□□□□□ -2
Trim58Q5NCC9 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.53□□□□□ -2
Trim58Q5NCC9 Gm25314-201ENSMUST00000178810 79 ntBASIC2.53□□□□□ -2
Trim58Q5NCC9 Gm23523-201ENSMUST00000180190 107 ntBASIC2.53□□□□□ -2
Trim58Q5NCC9 Mir6335-201ENSMUST00000184081 98 ntBASIC2.53□□□□□ -2
Trim58Q5NCC9 Gm36953-201ENSMUST00000195295 268 ntBASIC2.53□□□□□ -2
Trim58Q5NCC9 Mir669o-201ENSMUST00000103898 96 ntBASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Gm16328-201ENSMUST00000126985 196 ntBASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Gm24478-201ENSMUST00000157439 158 ntBASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Gm24757-201ENSMUST00000176987 371 ntBASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Gm27582-201ENSMUST00000184084 126 ntBASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Gm38050-201ENSMUST00000191904 238 ntBASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Gm18551-201ENSMUST00000195594 642 ntBASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Gm7495-201ENSMUST00000215099 426 ntBASIC2.52□□□□□ -2.01
Trim58Q5NCC9 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.52□□□□□ -2.01
Trim58Q5NCC9 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.52□□□□□ -2.01
Trim58Q5NCC9 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.52□□□□□ -2.01
Trim58Q5NCC9 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Trim58Q5NCC9 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Gm14843-201ENSMUST00000119596 212 ntBASIC2.51□□□□□ -2.01
Trim58Q5NCC9 Gm11834-201ENSMUST00000122257 585 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 161.8 ms