Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm22151-201ENSMUST00000116963 58 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm12443-201ENSMUST00000122308 323 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm25559-201ENSMUST00000157182 74 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm24716-201ENSMUST00000157524 104 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm25866-201ENSMUST00000158245 112 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm22841-201ENSMUST00000158443 62 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm17062-201ENSMUST00000166987 461 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm8532-201ENSMUST00000179174 461 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm28951-201ENSMUST00000190742 313 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm32033-201ENSMUST00000193483 339 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm43286-201ENSMUST00000197420 424 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm19140-201ENSMUST00000209790 421 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Snord14d-201ENSMUST00000083424 86 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm25628-201ENSMUST00000084002 105 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm23422-201ENSMUST00000102000 107 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm13355-201ENSMUST00000117996 317 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm13876-201ENSMUST00000118451 261 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm14013-201ENSMUST00000119006 270 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm14852-201ENSMUST00000120065 647 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm13862-201ENSMUST00000121220 197 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm26256-201ENSMUST00000122499 186 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm24438-201ENSMUST00000157893 115 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm20543-201ENSMUST00000174200 726 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm25243-201ENSMUST00000174912 207 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm27660-201ENSMUST00000184028 208 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Mir7062-201ENSMUST00000185038 66 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm23370-202ENSMUST00000197008 129 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm26263-201ENSMUST00000083281 164 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Olfr575-201ENSMUST00000084812 957 ntBASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Trim3Q9R1R2 Gm24049-201ENSMUST00000102409 100 ntBASIC2.18□□□□□ -2.06
Trim3Q9R1R2 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trim3Q9R1R2 Gm24780-201ENSMUST00000157635 143 ntBASIC2.18□□□□□ -2.06
Trim3Q9R1R2 Gm22554-201ENSMUST00000157798 147 ntBASIC2.18□□□□□ -2.06
Trim3Q9R1R2 Gm26401-201ENSMUST00000158502 76 ntBASIC2.18□□□□□ -2.06
Trim3Q9R1R2 Mir7667-201ENSMUST00000183866 63 ntBASIC2.18□□□□□ -2.06
Trim3Q9R1R2 Gm37557-201ENSMUST00000191640 139 ntBASIC2.18□□□□□ -2.06
Trim3Q9R1R2 Gm43487-201ENSMUST00000200331 1031 ntBASIC2.18□□□□□ -2.06
Trim3Q9R1R2 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.18□□□□□ -2.06
Trim3Q9R1R2 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.18□□□□□ -2.06
Trim3Q9R1R2 Gm5374-201ENSMUST00000222868 657 ntBASIC2.18□□□□□ -2.06
Trim3Q9R1R2 AC167192.1-201ENSMUST00000225908 139 ntBASIC2.18□□□□□ -2.06
Trim3Q9R1R2 Gm25796-201ENSMUST00000082645 163 ntBASIC2.18□□□□□ -2.06
Trim3Q9R1R2 Mir452-201ENSMUST00000093629 85 ntBASIC2.18□□□□□ -2.06
Trim3Q9R1R2 Gm26327-201ENSMUST00000093724 111 ntBASIC2.18□□□□□ -2.06
Trim3Q9R1R2 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm22779-201ENSMUST00000104085 107 ntBASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm12770-201ENSMUST00000121734 462 ntBASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm22083-201ENSMUST00000157586 102 ntBASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm24901-201ENSMUST00000158125 110 ntBASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm22668-201ENSMUST00000158716 260 ntBASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm27957-201ENSMUST00000184054 127 ntBASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm27490-201ENSMUST00000184754 128 ntBASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm27369-201ENSMUST00000185182 71 ntBASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm42739-201ENSMUST00000200687 226 ntBASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm44181-201ENSMUST00000203106 483 ntBASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trim3Q9R1R2 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.17□□□□□ -2.06
Trim3Q9R1R2 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.17□□□□□ -2.06
Trim3Q9R1R2 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trim3Q9R1R2 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 AC124426.1-203ENSMUST00000221814 1362 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm25529-201ENSMUST00000104850 92 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm15714-201ENSMUST00000117168 250 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm8858-201ENSMUST00000118259 342 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm14293-201ENSMUST00000118528 577 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm14301-201ENSMUST00000120181 324 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm16218-201ENSMUST00000155424 388 ntBASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.16□□□□□ -2.06
Trim3Q9R1R2 Gm23862-201ENSMUST00000180342 94 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 163.3 ms