Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Brf1Q8CFK2 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Gm13457-201ENSMUST00000117885 267 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Gm15936-201ENSMUST00000118706 460 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Gm14119-201ENSMUST00000119511 235 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Gm6079-201ENSMUST00000121356 404 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Defb44-ps-201ENSMUST00000126871 219 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Gm24481-201ENSMUST00000157210 102 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Gm22598-201ENSMUST00000157600 127 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Gm17187-201ENSMUST00000164622 410 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Gm19244-201ENSMUST00000204340 253 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Gm44881-201ENSMUST00000205425 367 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Gm44594-201ENSMUST00000208982 407 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Gm9318-201ENSMUST00000222444 438 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 AC154552.1-201ENSMUST00000222969 202 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Gm23042-201ENSMUST00000083866 101 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Brf1Q8CFK2 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.71□□□□□ -1.82
Brf1Q8CFK2 Gm14562-201ENSMUST00000129885 543 ntBASIC3.7□□□□□ -1.82
Brf1Q8CFK2 Gm25121-201ENSMUST00000179846 79 ntBASIC3.7□□□□□ -1.82
Brf1Q8CFK2 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC3.7□□□□□ -1.82
Brf1Q8CFK2 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.7□□□□□ -1.82
Brf1Q8CFK2 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.7□□□□□ -1.82
Brf1Q8CFK2 Gm28288-201ENSMUST00000191019 214 ntBASIC3.7□□□□□ -1.82
Brf1Q8CFK2 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Brf1Q8CFK2 Gm43402-201ENSMUST00000197159 159 ntBASIC3.7□□□□□ -1.82
Brf1Q8CFK2 Gm43746-201ENSMUST00000200028 317 ntBASIC3.7□□□□□ -1.82
Brf1Q8CFK2 Gm45273-201ENSMUST00000211559 281 ntBASIC3.7□□□□□ -1.82
Brf1Q8CFK2 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Brf1Q8CFK2 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.7□□□□□ -1.82
Brf1Q8CFK2 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Brf1Q8CFK2 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Brf1Q8CFK2 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Gm14296-202ENSMUST00000108931 750 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Gm14551-201ENSMUST00000120802 256 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Gm12785-201ENSMUST00000122052 172 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Gm23581-201ENSMUST00000158531 63 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Gm23053-201ENSMUST00000175136 96 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Gm26297-201ENSMUST00000179464 132 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Gm22951-201ENSMUST00000179471 107 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Gm28314-201ENSMUST00000191276 345 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Gm19620-201ENSMUST00000195972 434 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Gm43914-201ENSMUST00000203592 594 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Gm44520-201ENSMUST00000205447 802 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Mir496a-201ENSMUST00000093627 79 ntBASIC3.69□□□□□ -1.82
Brf1Q8CFK2 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm650-201ENSMUST00000144428 1551 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm14973-201ENSMUST00000117248 255 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm14518-201ENSMUST00000117351 542 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm22225-201ENSMUST00000157358 278 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm22187-201ENSMUST00000157819 129 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm24885-201ENSMUST00000158783 270 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm25162-201ENSMUST00000158906 159 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm20450-201ENSMUST00000173652 147 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm24086-201ENSMUST00000175171 98 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm27535-201ENSMUST00000183814 157 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm45207-201ENSMUST00000207469 145 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm45616-201ENSMUST00000211711 319 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC3.68□□□□□ -1.82
Brf1Q8CFK2 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm26447-201ENSMUST00000082448 129 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm22806-201ENSMUST00000082738 136 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm23454-201ENSMUST00000083332 133 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Mir184-201ENSMUST00000083662 69 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm22353-201ENSMUST00000083918 136 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Brf1Q8CFK2 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Gm36989-201ENSMUST00000193225 2160 ntBASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Brf1Q8CFK2 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Brf1Q8CFK2 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Brf1Q8CFK2 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.67□□□□□ -1.82
Brf1Q8CFK2 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.67□□□□□ -1.82
Brf1Q8CFK2 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Brf1Q8CFK2 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.67□□□□□ -1.82
Brf1Q8CFK2 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Brf1Q8CFK2 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 188.1 ms