Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm45101-201ENSMUST00000208327 232 ntBASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Gm24948-201ENSMUST00000082866 207 ntBASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Gm22974-201ENSMUST00000083301 103 ntBASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Gm23650-201ENSMUST00000083355 70 ntBASIC2.6□□□□□ -1.99
Trim58Q5NCC9 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm22957-201ENSMUST00000122511 123 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm22452-201ENSMUST00000122804 104 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm9071-201ENSMUST00000165915 474 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm24418-201ENSMUST00000177597 79 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm24639-201ENSMUST00000178518 79 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm22851-201ENSMUST00000178741 94 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm25074-201ENSMUST00000178782 94 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm23076-201ENSMUST00000179082 79 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm25077-201ENSMUST00000179157 79 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm27245-201ENSMUST00000184385 376 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm27520-201ENSMUST00000184872 81 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm18982-201ENSMUST00000198118 529 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm45252-201ENSMUST00000211579 397 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.59□□□□□ -1.99
Trim58Q5NCC9 AC109214.2-201ENSMUST00000220089 358 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.59□□□□□ -1.99
Trim58Q5NCC9 AC154747.1-201ENSMUST00000225265 239 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm24045-201ENSMUST00000083113 98 ntBASIC2.59□□□□□ -1.99
Trim58Q5NCC9 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm25094-201ENSMUST00000103992 131 ntBASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm13343-201ENSMUST00000116474 105 ntBASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm12871-201ENSMUST00000118758 438 ntBASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.58□□□□□ -2
Trim58Q5NCC9 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm14364-201ENSMUST00000129209 267 ntBASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm26914-201ENSMUST00000182262 223 ntBASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm27660-201ENSMUST00000184028 208 ntBASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm29192-201ENSMUST00000190942 377 ntBASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.58□□□□□ -2
Trim58Q5NCC9 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.58□□□□□ -2
Trim58Q5NCC9 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.58□□□□□ -2
Trim58Q5NCC9 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.58□□□□□ -2
Trim58Q5NCC9 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trim58Q5NCC9 Gm23093-201ENSMUST00000083450 102 ntBASIC2.58□□□□□ -2
Trim58Q5NCC9 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm12386-201ENSMUST00000117380 688 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm13331-201ENSMUST00000117500 448 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm12191-201ENSMUST00000118307 348 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm14013-201ENSMUST00000119006 270 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm14940-201ENSMUST00000119309 495 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm9703-201ENSMUST00000119573 343 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm22136-201ENSMUST00000158751 268 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm26159-201ENSMUST00000158968 104 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm6788-201ENSMUST00000166459 270 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm24813-201ENSMUST00000175310 84 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm24264-201ENSMUST00000179835 94 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Mir7081-201ENSMUST00000184490 75 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm29134-201ENSMUST00000186579 126 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm7654-201ENSMUST00000186738 683 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm28414-201ENSMUST00000190111 294 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm28337-201ENSMUST00000190425 666 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm36866-201ENSMUST00000193343 657 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm36047-201ENSMUST00000193659 657 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm20857-201ENSMUST00000194766 657 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm20858-201ENSMUST00000195459 657 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC2.57□□□□□ -2
Trim58Q5NCC9 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm25130-201ENSMUST00000082650 156 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm25856-201ENSMUST00000082786 75 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Gm25411-201ENSMUST00000083760 151 ntBASIC2.57□□□□□ -2
Trim58Q5NCC9 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trim58Q5NCC9 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm26154-201ENSMUST00000102339 96 ntBASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm24068-201ENSMUST00000104513 132 ntBASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm13510-201ENSMUST00000118659 429 ntBASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm15936-201ENSMUST00000118706 460 ntBASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm25621-201ENSMUST00000157223 114 ntBASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm22611-201ENSMUST00000158288 150 ntBASIC2.56□□□□□ -2
Trim58Q5NCC9 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.56□□□□□ -2
Trim58Q5NCC9 Gm17186-201ENSMUST00000171742 456 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 158.5 ms