Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm28597-201ENSMUST00000187664 666 ntBASIC2.24□□□□□ -2.05
Trim3Q9R1R2 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC2.24□□□□□ -2.05
Trim3Q9R1R2 Gm18775-201ENSMUST00000190763 586 ntBASIC2.24□□□□□ -2.05
Trim3Q9R1R2 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC2.24□□□□□ -2.05
Trim3Q9R1R2 Gm37771-201ENSMUST00000193121 265 ntBASIC2.24□□□□□ -2.05
Trim3Q9R1R2 Gm38238-201ENSMUST00000194334 346 ntBASIC2.24□□□□□ -2.05
Trim3Q9R1R2 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.24□□□□□ -2.05
Trim3Q9R1R2 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Trim3Q9R1R2 Gm24045-201ENSMUST00000083113 98 ntBASIC2.24□□□□□ -2.05
Trim3Q9R1R2 Gm26108-201ENSMUST00000083973 191 ntBASIC2.24□□□□□ -2.05
Trim3Q9R1R2 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Trim3Q9R1R2 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.24□□□□□ -2.05
Trim3Q9R1R2 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Trim3Q9R1R2 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.23□□□□□ -2.05
Trim3Q9R1R2 Gm16355-201ENSMUST00000128606 231 ntBASIC2.23□□□□□ -2.05
Trim3Q9R1R2 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Trim3Q9R1R2 Gm24075-201ENSMUST00000158175 72 ntBASIC2.23□□□□□ -2.05
Trim3Q9R1R2 Gm24210-201ENSMUST00000158263 133 ntBASIC2.23□□□□□ -2.05
Trim3Q9R1R2 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC2.23□□□□□ -2.05
Trim3Q9R1R2 Gm27919-201ENSMUST00000185163 107 ntBASIC2.23□□□□□ -2.05
Trim3Q9R1R2 Gm19694-201ENSMUST00000192364 505 ntBASIC2.23□□□□□ -2.05
Trim3Q9R1R2 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.23□□□□□ -2.05
Trim3Q9R1R2 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.23□□□□□ -2.05
Trim3Q9R1R2 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.23□□□□□ -2.05
Trim3Q9R1R2 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.23□□□□□ -2.05
Trim3Q9R1R2 Gm23727-201ENSMUST00000083352 164 ntBASIC2.23□□□□□ -2.05
Trim3Q9R1R2 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trim3Q9R1R2 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trim3Q9R1R2 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.23□□□□□ -2.05
Trim3Q9R1R2 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trim3Q9R1R2 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm13756-201ENSMUST00000117618 222 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm12225-201ENSMUST00000117995 298 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm15497-201ENSMUST00000119137 551 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm23429-201ENSMUST00000122486 149 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm24911-201ENSMUST00000157292 136 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm25863-201ENSMUST00000158249 329 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm24212-201ENSMUST00000158258 132 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm15914-201ENSMUST00000161922 309 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Mir5101-201ENSMUST00000175181 83 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm9022-202ENSMUST00000183285 483 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm18000-201ENSMUST00000212153 800 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm18774-201ENSMUST00000218269 601 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm18113-201ENSMUST00000220630 303 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm10298-201ENSMUST00000074801 265 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm22866-201ENSMUST00000083947 177 ntBASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Trim3Q9R1R2 Gm22752-201ENSMUST00000102083 109 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm14588-201ENSMUST00000119895 172 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm23889-201ENSMUST00000122689 104 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm24908-201ENSMUST00000157294 127 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm24393-201ENSMUST00000158135 97 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm25163-201ENSMUST00000158905 104 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Mir3075-201ENSMUST00000175340 85 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm24168-201ENSMUST00000178825 107 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm24518-201ENSMUST00000180275 94 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm5329-201ENSMUST00000186898 463 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm20058-201ENSMUST00000186939 284 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm28151-201ENSMUST00000189404 951 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm29950-201ENSMUST00000195273 237 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm44142-201ENSMUST00000203358 311 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm44524-201ENSMUST00000203899 271 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm6796-201ENSMUST00000211919 243 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 AL935138.1-201ENSMUST00000215309 196 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm46389-201ENSMUST00000223199 392 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm23454-201ENSMUST00000083332 133 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Snord38a-201ENSMUST00000083746 71 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Snord7-201ENSMUST00000083781 97 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Gm26166-201ENSMUST00000083788 107 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Mir127-201ENSMUST00000093568 70 ntBASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Trim3Q9R1R2 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Trim3Q9R1R2 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Mir687-201ENSMUST00000102166 89 ntBASIC2.2□□□□□ -2.06
Trim3Q9R1R2 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 238.4 ms