Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RpainQ9CWY9 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RpainQ9CWY9 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
RpainQ9CWY9 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
RpainQ9CWY9 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RpainQ9CWY9 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Gm15029-201ENSMUST00000119742 199 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Gm26479-201ENSMUST00000122620 106 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Gm23234-201ENSMUST00000157304 134 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Gm25920-201ENSMUST00000158307 99 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Gm2862-201ENSMUST00000161524 328 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Gm3370-201ENSMUST00000171785 500 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Gm25817-201ENSMUST00000177758 121 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Gm24766-201ENSMUST00000179182 121 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Gm43250-201ENSMUST00000196536 273 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Gm9379-201ENSMUST00000196790 646 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Gm9402-201ENSMUST00000196849 388 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Gm44481-201ENSMUST00000197288 84 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Gm44339-201ENSMUST00000200598 84 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC3.84□□□□□ -1.79
RpainQ9CWY9 Gm9795-201ENSMUST00000062156 693 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.84□□□□□ -1.79
RpainQ9CWY9 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RpainQ9CWY9 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RpainQ9CWY9 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
RpainQ9CWY9 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RpainQ9CWY9 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RpainQ9CWY9 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RpainQ9CWY9 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm11572-201ENSMUST00000119164 120 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm15162-201ENSMUST00000119325 283 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm5937-201ENSMUST00000119715 643 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm26276-201ENSMUST00000157099 109 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm24481-201ENSMUST00000157210 102 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm23198-201ENSMUST00000158811 91 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm26287-201ENSMUST00000158887 81 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm28030-201ENSMUST00000184987 138 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm28453-203ENSMUST00000187041 189 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm37431-201ENSMUST00000195102 111 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm45513-201ENSMUST00000210228 376 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm23443-201ENSMUST00000082916 128 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm23650-201ENSMUST00000083355 70 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.83□□□□□ -1.8
RpainQ9CWY9 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RpainQ9CWY9 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RpainQ9CWY9 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.83□□□□□ -1.8
RpainQ9CWY9 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RpainQ9CWY9 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
RpainQ9CWY9 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RpainQ9CWY9 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm25833-201ENSMUST00000104137 133 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm23532-201ENSMUST00000104569 112 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm12125-201ENSMUST00000117261 736 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm11982-201ENSMUST00000121480 314 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm12858-201ENSMUST00000121913 208 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm22984-201ENSMUST00000122751 122 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm6265-201ENSMUST00000149263 231 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm24061-201ENSMUST00000157489 120 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm25720-201ENSMUST00000157503 105 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm25436-201ENSMUST00000158275 145 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm25834-201ENSMUST00000158916 101 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.82□□□□□ -1.8
RpainQ9CWY9 Mir6372-201ENSMUST00000185114 109 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.82□□□□□ -1.8
RpainQ9CWY9 Mir3535-201ENSMUST00000197651 147 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm44076-201ENSMUST00000203072 520 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm44533-201ENSMUST00000207782 268 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm6842-201ENSMUST00000211361 390 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm8274-201ENSMUST00000219820 463 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm46993-201ENSMUST00000220708 259 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm25081-201ENSMUST00000082534 108 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Gm22685-201ENSMUST00000082848 106 ntBASIC3.82□□□□□ -1.8
RpainQ9CWY9 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RpainQ9CWY9 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
RpainQ9CWY9 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RpainQ9CWY9 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RpainQ9CWY9 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.81□□□□□ -1.8
RpainQ9CWY9 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RpainQ9CWY9 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.81□□□□□ -1.8
RpainQ9CWY9 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.81□□□□□ -1.8
RpainQ9CWY9 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RpainQ9CWY9 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RpainQ9CWY9 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 129.3 ms