Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Brf1Q8CFK2 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Gm22957-201ENSMUST00000122511 123 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Gm27926-201ENSMUST00000157180 66 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Gm23956-201ENSMUST00000157211 119 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Gm22675-201ENSMUST00000158430 104 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Gm25902-201ENSMUST00000158493 318 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Gm25486-201ENSMUST00000158726 63 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Gm23977-201ENSMUST00000177871 74 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Mir6346-201ENSMUST00000183982 81 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Gm27520-201ENSMUST00000184872 81 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Gm28534-201ENSMUST00000187744 676 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Mir3970-201ENSMUST00000199287 90 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Gm7948-201ENSMUST00000212607 844 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Gm7422-201ENSMUST00000220115 640 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 AC167140.1-201ENSMUST00000224710 403 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Gm24948-201ENSMUST00000082866 207 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Brf1Q8CFK2 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Brf1Q8CFK2 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Gm24096-201ENSMUST00000103905 110 ntBASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Gm24403-201ENSMUST00000104616 130 ntBASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Gm23234-201ENSMUST00000157304 134 ntBASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Gm27510-201ENSMUST00000158214 64 ntBASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Gm24730-201ENSMUST00000158228 117 ntBASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Gm22516-201ENSMUST00000158266 124 ntBASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Gm17186-201ENSMUST00000171742 456 ntBASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Mir7658-201ENSMUST00000184043 57 ntBASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Gm43739-201ENSMUST00000198294 307 ntBASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Gm44655-201ENSMUST00000207768 423 ntBASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Gm45315-201ENSMUST00000209283 333 ntBASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Gm25793-201ENSMUST00000083287 107 ntBASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Brf1Q8CFK2 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm7853-201ENSMUST00000100708 478 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm14389-201ENSMUST00000140453 241 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm9830-201ENSMUST00000178509 357 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm29512-201ENSMUST00000185544 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28110-201ENSMUST00000185782 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28838-201ENSMUST00000186338 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm29057-201ENSMUST00000186468 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm29661-201ENSMUST00000186781 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28737-201ENSMUST00000186808 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm29118-201ENSMUST00000186908 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28433-201ENSMUST00000187085 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm29635-201ENSMUST00000187221 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28759-201ENSMUST00000187621 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28831-201ENSMUST00000187739 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28200-201ENSMUST00000187778 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm29026-201ENSMUST00000187787 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28752-201ENSMUST00000188340 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28797-201ENSMUST00000188543 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28855-201ENSMUST00000188680 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm29378-201ENSMUST00000188723 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28569-201ENSMUST00000188748 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28120-201ENSMUST00000188812 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28369-201ENSMUST00000188993 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm29037-201ENSMUST00000189092 313 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28909-201ENSMUST00000189406 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28705-201ENSMUST00000189548 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28861-201ENSMUST00000189681 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm29180-201ENSMUST00000190003 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28939-201ENSMUST00000190351 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm28223-201ENSMUST00000190469 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm29575-201ENSMUST00000190597 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm29092-201ENSMUST00000190768 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm29469-201ENSMUST00000191448 315 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm44844-201ENSMUST00000207242 336 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm22247-201ENSMUST00000082476 131 ntBASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Brf1Q8CFK2 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.71□□□□□ -1.81
Brf1Q8CFK2 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 142.1 ms