Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.12□□□□□ -1.75
Ubp1Q811S7 Mir6391-201ENSMUST00000184391 104 ntBASIC4.12□□□□□ -1.75
Ubp1Q811S7 Gm27899-201ENSMUST00000184715 64 ntBASIC4.12□□□□□ -1.75
Ubp1Q811S7 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.12□□□□□ -1.75
Ubp1Q811S7 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.12□□□□□ -1.75
Ubp1Q811S7 Gm43220-201ENSMUST00000199299 282 ntBASIC4.12□□□□□ -1.75
Ubp1Q811S7 AC167669.4-201ENSMUST00000225967 140 ntBASIC4.12□□□□□ -1.75
Ubp1Q811S7 Gm23444-201ENSMUST00000082922 191 ntBASIC4.12□□□□□ -1.75
Ubp1Q811S7 Mir27a-201ENSMUST00000083510 87 ntBASIC4.12□□□□□ -1.75
Ubp1Q811S7 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ubp1Q811S7 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ubp1Q811S7 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.12□□□□□ -1.75
Ubp1Q811S7 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ubp1Q811S7 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ubp1Q811S7 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ubp1Q811S7 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.11□□□□□ -1.75
Ubp1Q811S7 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ubp1Q811S7 Gm12173-201ENSMUST00000117622 273 ntBASIC4.11□□□□□ -1.75
Ubp1Q811S7 Mir6960-201ENSMUST00000183449 61 ntBASIC4.11□□□□□ -1.75
Ubp1Q811S7 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.11□□□□□ -1.75
Ubp1Q811S7 Gm19908-201ENSMUST00000204684 391 ntBASIC4.11□□□□□ -1.75
Ubp1Q811S7 Gm45907-201ENSMUST00000213023 193 ntBASIC4.11□□□□□ -1.75
Ubp1Q811S7 Gm18015-201ENSMUST00000214879 316 ntBASIC4.11□□□□□ -1.75
Ubp1Q811S7 AC155923.1-201ENSMUST00000215676 356 ntBASIC4.11□□□□□ -1.75
Ubp1Q811S7 AC166830.2-201ENSMUST00000225821 196 ntBASIC4.11□□□□□ -1.75
Ubp1Q811S7 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.11□□□□□ -1.75
Ubp1Q811S7 Gm24204-201ENSMUST00000082950 107 ntBASIC4.11□□□□□ -1.75
Ubp1Q811S7 Gm26495-201ENSMUST00000083152 137 ntBASIC4.11□□□□□ -1.75
Ubp1Q811S7 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ubp1Q811S7 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ubp1Q811S7 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ubp1Q811S7 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
Ubp1Q811S7 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.1□□□□□ -1.75
Ubp1Q811S7 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.1□□□□□ -1.75
Ubp1Q811S7 Snord19-201ENSMUST00000104609 76 ntBASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gm24061-201ENSMUST00000157489 120 ntBASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gm23098-201ENSMUST00000157552 299 ntBASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gm22217-201ENSMUST00000157556 313 ntBASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gm23905-201ENSMUST00000157568 109 ntBASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gm25908-201ENSMUST00000157624 98 ntBASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gm25015-201ENSMUST00000158400 128 ntBASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gm46138-201ENSMUST00000215294 426 ntBASIC4.1□□□□□ -1.75
Ubp1Q811S7 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gm25930-201ENSMUST00000082785 107 ntBASIC4.1□□□□□ -1.75
Ubp1Q811S7 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.1□□□□□ -1.75
Ubp1Q811S7 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ubp1Q811S7 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Ubp1Q811S7 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ubp1Q811S7 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Ubp1Q811S7 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ubp1Q811S7 Gm37479-201ENSMUST00000194169 3841 ntBASIC4.09□□□□□ -1.75
Ubp1Q811S7 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ubp1Q811S7 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Ubp1Q811S7 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ubp1Q811S7 Gm43230-201ENSMUST00000200980 2129 ntBASIC4.09□□□□□ -1.75
Ubp1Q811S7 Gm26019-201ENSMUST00000104407 119 ntBASIC4.09□□□□□ -1.75
Ubp1Q811S7 Gm23178-201ENSMUST00000116782 95 ntBASIC4.09□□□□□ -1.75
Ubp1Q811S7 Gm23226-201ENSMUST00000116927 103 ntBASIC4.09□□□□□ -1.75
Ubp1Q811S7 Gm8666-201ENSMUST00000117517 292 ntBASIC4.09□□□□□ -1.75
Ubp1Q811S7 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC4.09□□□□□ -1.75
Ubp1Q811S7 Gm23559-201ENSMUST00000157824 103 ntBASIC4.09□□□□□ -1.75
Ubp1Q811S7 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.09□□□□□ -1.75
Ubp1Q811S7 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ubp1Q811S7 Gm17067-202ENSMUST00000180131 123 ntBASIC4.09□□□□□ -1.75
Ubp1Q811S7 Mir6414-201ENSMUST00000183685 82 ntBASIC4.09□□□□□ -1.75
Ubp1Q811S7 Gm27761-201ENSMUST00000184091 131 ntBASIC4.09□□□□□ -1.75
Ubp1Q811S7 Gm37997-201ENSMUST00000193515 267 ntBASIC4.09□□□□□ -1.75
Ubp1Q811S7 Gm8820-201ENSMUST00000204077 571 ntBASIC4.09□□□□□ -1.75
Ubp1Q811S7 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.09□□□□□ -1.75
Ubp1Q811S7 Gm23928-201ENSMUST00000082469 145 ntBASIC4.09□□□□□ -1.75
Ubp1Q811S7 Mir29b-2-201ENSMUST00000083478 81 ntBASIC4.09□□□□□ -1.75
Ubp1Q811S7 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ubp1Q811S7 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.09□□□□□ -1.76
Ubp1Q811S7 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Ubp1Q811S7 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ubp1Q811S7 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ubp1Q811S7 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ubp1Q811S7 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ubp1Q811S7 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Ubp1Q811S7 Gm26027-201ENSMUST00000122725 268 ntBASIC4.08□□□□□ -1.76
Ubp1Q811S7 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ubp1Q811S7 Gm16250-201ENSMUST00000148974 256 ntBASIC4.08□□□□□ -1.76
Ubp1Q811S7 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Ubp1Q811S7 Gm22211-201ENSMUST00000158097 156 ntBASIC4.08□□□□□ -1.76
Ubp1Q811S7 Gm26036-201ENSMUST00000158149 144 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 188.8 ms