Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.64□□□□□ -1.99
Trim58Q5NCC9 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.64□□□□□ -1.99
Trim58Q5NCC9 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.64□□□□□ -1.99
Trim58Q5NCC9 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Trim58Q5NCC9 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trim58Q5NCC9 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm25376-201ENSMUST00000104340 133 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm11522-201ENSMUST00000120533 176 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm14069-201ENSMUST00000120815 229 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm22225-201ENSMUST00000157358 278 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Cfap61-214ENSMUST00000167179 183 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm20534-201ENSMUST00000172957 172 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm24713-201ENSMUST00000178850 107 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm25448-201ENSMUST00000180065 107 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm24518-201ENSMUST00000180275 94 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm27399-201ENSMUST00000184250 78 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Mir7016-201ENSMUST00000184308 72 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Mir6383-201ENSMUST00000184545 116 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm27490-201ENSMUST00000184754 128 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.63□□□□□ -1.99
Trim58Q5NCC9 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm37658-201ENSMUST00000192672 315 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Trbv18-201ENSMUST00000194256 294 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm43431-201ENSMUST00000198577 340 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm44726-201ENSMUST00000203427 217 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm45772-201ENSMUST00000212961 240 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm23741-201ENSMUST00000097237 171 ntBASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Trim58Q5NCC9 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Gm24889-201ENSMUST00000104388 132 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Gm15844-201ENSMUST00000118016 576 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Gm11384-201ENSMUST00000121376 303 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Gm25107-201ENSMUST00000122472 129 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Gm23391-201ENSMUST00000157579 104 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Gm23342-201ENSMUST00000158958 115 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Gm26195-201ENSMUST00000175035 101 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Gm23190-201ENSMUST00000180307 64 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Gm37119-201ENSMUST00000195691 389 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Gm44657-201ENSMUST00000208568 450 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.62□□□□□ -1.99
Trim58Q5NCC9 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Gm22061-201ENSMUST00000082557 107 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Gm25199-201ENSMUST00000083095 104 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Snord38a-201ENSMUST00000083746 71 ntBASIC2.62□□□□□ -1.99
Trim58Q5NCC9 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Gm25168-201ENSMUST00000104189 132 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Gm13880-201ENSMUST00000118421 474 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Gm12956-201ENSMUST00000122184 414 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Gm15899-201ENSMUST00000128586 238 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Trim58Q5NCC9 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Gm18964-201ENSMUST00000193013 563 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Gm44476-201ENSMUST00000196225 91 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Gm43355-201ENSMUST00000196541 346 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Gm44324-201ENSMUST00000198517 135 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Gm44477-201ENSMUST00000199661 110 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Gm22978-201ENSMUST00000082607 160 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Gm23515-201ENSMUST00000082829 107 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trim58Q5NCC9 Mir1195-201ENSMUST00000116818 98 ntBASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Gm12806-201ENSMUST00000119384 268 ntBASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Gm11849-201ENSMUST00000121293 261 ntBASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Gm8207-201ENSMUST00000171204 502 ntBASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Gm20450-201ENSMUST00000173652 147 ntBASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Gm20656-201ENSMUST00000176925 518 ntBASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Gm28647-201ENSMUST00000188416 197 ntBASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Gm37029-201ENSMUST00000195773 239 ntBASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.6□□□□□ -1.99
Trim58Q5NCC9 Gm44011-201ENSMUST00000203336 394 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 140.1 ms