Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Gm5548-201ENSMUST00000055878 397 ntBASIC3.5□□□□□ -1.85
Rnft1Q9DCN7 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Rnft1Q9DCN7 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rnft1Q9DCN7 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Rnft1Q9DCN7 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rnft1Q9DCN7 Gm650-201ENSMUST00000144428 1551 ntBASIC3.5□□□□□ -1.85
Rnft1Q9DCN7 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Rnft1Q9DCN7 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm24423-201ENSMUST00000101982 106 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm23256-201ENSMUST00000102235 110 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm22758-201ENSMUST00000102275 96 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm26140-201ENSMUST00000103807 110 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm12125-201ENSMUST00000117261 736 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm15613-201ENSMUST00000118396 326 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm11693-201ENSMUST00000119625 565 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm12858-201ENSMUST00000121913 208 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm26479-201ENSMUST00000122620 106 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm25967-201ENSMUST00000157168 147 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm2962-201ENSMUST00000159266 336 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm17187-201ENSMUST00000164622 410 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm22908-201ENSMUST00000177620 110 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm28849-201ENSMUST00000188127 174 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm28330-201ENSMUST00000190353 171 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm44960-201ENSMUST00000207403 141 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm45273-201ENSMUST00000211559 281 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 AC145736.2-201ENSMUST00000216305 365 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm18921-201ENSMUST00000221798 366 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm22245-201ENSMUST00000082479 103 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Mir10a-201ENSMUST00000083585 110 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.49□□□□□ -1.85
Rnft1Q9DCN7 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm24121-201ENSMUST00000102029 106 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm13567-201ENSMUST00000118026 247 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm14810-201ENSMUST00000121628 486 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm27510-201ENSMUST00000158214 64 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm22766-201ENSMUST00000158372 99 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm22531-201ENSMUST00000158819 140 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Mir5129-201ENSMUST00000174938 78 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm27308-201ENSMUST00000184807 233 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm28623-201ENSMUST00000187219 192 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm29140-201ENSMUST00000190187 476 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm43250-201ENSMUST00000196536 273 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm16419-201ENSMUST00000221057 625 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Rnft1Q9DCN7 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Gm13541-201ENSMUST00000119519 283 ntBASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Gm15760-201ENSMUST00000119553 283 ntBASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Gm3370-201ENSMUST00000171785 500 ntBASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Gm25999-201ENSMUST00000175398 133 ntBASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Mir6414-201ENSMUST00000183685 82 ntBASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Gm29657-201ENSMUST00000189807 342 ntBASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Gm6615-201ENSMUST00000199426 631 ntBASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Gm7041-201ENSMUST00000201227 524 ntBASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Rnft1Q9DCN7 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 157.5 ms