Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm27421-201ENSMUST00000184729 167 ntBASIC3.88□□□□□ -1.79
RpainQ9CWY9 Gm28623-201ENSMUST00000187219 192 ntBASIC3.88□□□□□ -1.79
RpainQ9CWY9 Gm29408-201ENSMUST00000187536 216 ntBASIC3.88□□□□□ -1.79
RpainQ9CWY9 Gm29657-201ENSMUST00000189807 342 ntBASIC3.88□□□□□ -1.79
RpainQ9CWY9 Gm5829-201ENSMUST00000191383 351 ntBASIC3.88□□□□□ -1.79
RpainQ9CWY9 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.88□□□□□ -1.79
RpainQ9CWY9 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RpainQ9CWY9 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RpainQ9CWY9 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.88□□□□□ -1.79
RpainQ9CWY9 Mir471-201ENSMUST00000093596 67 ntBASIC3.88□□□□□ -1.79
RpainQ9CWY9 Gm10343-201ENSMUST00000096279 348 ntBASIC3.88□□□□□ -1.79
RpainQ9CWY9 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RpainQ9CWY9 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RpainQ9CWY9 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.88□□□□□ -1.79
RpainQ9CWY9 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.88□□□□□ -1.79
RpainQ9CWY9 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RpainQ9CWY9 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm24423-201ENSMUST00000101982 106 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Mir687-201ENSMUST00000102166 89 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm11367-201ENSMUST00000117802 120 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm24014-201ENSMUST00000157728 157 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm22889-201ENSMUST00000158639 58 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm23209-201ENSMUST00000158667 110 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm2962-201ENSMUST00000159266 336 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm17020-201ENSMUST00000172274 274 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm27245-201ENSMUST00000184385 376 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm37089-201ENSMUST00000195616 129 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm44092-201ENSMUST00000204470 258 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm45315-201ENSMUST00000209283 333 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm45553-201ENSMUST00000209929 507 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm22061-201ENSMUST00000082557 107 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Gm26454-201ENSMUST00000082682 107 ntBASIC3.87□□□□□ -1.79
RpainQ9CWY9 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
RpainQ9CWY9 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RpainQ9CWY9 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RpainQ9CWY9 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RpainQ9CWY9 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RpainQ9CWY9 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RpainQ9CWY9 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RpainQ9CWY9 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RpainQ9CWY9 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
RpainQ9CWY9 Gm650-201ENSMUST00000144428 1551 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
RpainQ9CWY9 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
RpainQ9CWY9 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RpainQ9CWY9 Gm24581-201ENSMUST00000103962 133 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 Gm15037-201ENSMUST00000120358 259 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 Gm25783-201ENSMUST00000122525 190 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 Gm26279-201ENSMUST00000157095 102 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 Mir713-201ENSMUST00000178651 108 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 Gm29330-201ENSMUST00000190032 699 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 Gm9696-202ENSMUST00000191541 830 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.86□□□□□ -1.79
RpainQ9CWY9 Gm44324-201ENSMUST00000198517 135 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.86□□□□□ -1.79
RpainQ9CWY9 Gm44844-201ENSMUST00000207242 336 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 LOC667541-201ENSMUST00000223408 278 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 Gm23932-201ENSMUST00000082914 107 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 Gm22704-201ENSMUST00000083027 137 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.86□□□□□ -1.79
RpainQ9CWY9 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RpainQ9CWY9 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm24121-201ENSMUST00000102029 106 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm25765-201ENSMUST00000104100 132 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm15244-201ENSMUST00000121122 130 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm15733-201ENSMUST00000132957 242 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm25621-201ENSMUST00000157223 114 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm23232-201ENSMUST00000157300 105 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm25664-201ENSMUST00000157697 107 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm23257-201ENSMUST00000158322 132 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm22113-201ENSMUST00000158343 104 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm24676-201ENSMUST00000158758 75 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm25450-201ENSMUST00000179144 107 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm43583-201ENSMUST00000199235 303 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm44208-201ENSMUST00000205199 421 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm44960-201ENSMUST00000207403 141 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm26066-201ENSMUST00000083385 109 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Mir10a-201ENSMUST00000083585 110 ntBASIC3.85□□□□□ -1.79
RpainQ9CWY9 Gm23041-201ENSMUST00000083868 106 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms