Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.78□□□□□ -1.8
Brf1Q8CFK2 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Gm13876-201ENSMUST00000118451 261 ntBASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Gm23120-201ENSMUST00000157654 287 ntBASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Gm23865-201ENSMUST00000157723 97 ntBASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Gm24213-201ENSMUST00000158255 258 ntBASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Gm23262-201ENSMUST00000158323 168 ntBASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Gm27783-201ENSMUST00000183534 105 ntBASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Mir8096-201ENSMUST00000184526 127 ntBASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Gm25203-202ENSMUST00000200458 216 ntBASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Gm44811-201ENSMUST00000209120 228 ntBASIC3.78□□□□□ -1.8
Brf1Q8CFK2 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Gm25203-201ENSMUST00000082842 215 ntBASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Snora70-201ENSMUST00000083047 137 ntBASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Brf1Q8CFK2 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.78□□□□□ -1.81
Brf1Q8CFK2 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Brf1Q8CFK2 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Brf1Q8CFK2 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm15088-201ENSMUST00000117973 1508 ntBASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm15098-201ENSMUST00000119036 1508 ntBASIC3.77□□□□□ -1.81
Brf1Q8CFK2 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm25220-201ENSMUST00000157546 95 ntBASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm16232-201ENSMUST00000162856 167 ntBASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm20672-201ENSMUST00000176605 261 ntBASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm22108-201ENSMUST00000177961 106 ntBASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm24798-201ENSMUST00000179334 106 ntBASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm27760-201ENSMUST00000185048 114 ntBASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm29104-201ENSMUST00000186304 222 ntBASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm9402-201ENSMUST00000196849 388 ntBASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm18982-201ENSMUST00000198118 529 ntBASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC3.77□□□□□ -1.81
Brf1Q8CFK2 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm45395-201ENSMUST00000209891 559 ntBASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Brf1Q8CFK2 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.76□□□□□ -1.81
Brf1Q8CFK2 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Brf1Q8CFK2 Mir1198-201ENSMUST00000116995 121 ntBASIC3.76□□□□□ -1.81
Brf1Q8CFK2 Gm15029-201ENSMUST00000119742 199 ntBASIC3.76□□□□□ -1.81
Brf1Q8CFK2 Gm22956-201ENSMUST00000122520 80 ntBASIC3.76□□□□□ -1.81
Brf1Q8CFK2 Gm22448-201ENSMUST00000179254 107 ntBASIC3.76□□□□□ -1.81
Brf1Q8CFK2 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Brf1Q8CFK2 Mir7227-201ENSMUST00000200408 59 ntBASIC3.76□□□□□ -1.81
Brf1Q8CFK2 Gm44419-201ENSMUST00000203338 229 ntBASIC3.76□□□□□ -1.81
Brf1Q8CFK2 Gm45403-201ENSMUST00000209453 276 ntBASIC3.76□□□□□ -1.81
Brf1Q8CFK2 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.76□□□□□ -1.81
Brf1Q8CFK2 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.76□□□□□ -1.81
Brf1Q8CFK2 Gm25141-201ENSMUST00000083177 107 ntBASIC3.76□□□□□ -1.81
Brf1Q8CFK2 Gm26066-201ENSMUST00000083385 109 ntBASIC3.76□□□□□ -1.81
Brf1Q8CFK2 Gm25257-201ENSMUST00000083907 110 ntBASIC3.76□□□□□ -1.81
Brf1Q8CFK2 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.76□□□□□ -1.81
Brf1Q8CFK2 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Brf1Q8CFK2 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.76□□□□□ -1.81
Brf1Q8CFK2 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm13396-201ENSMUST00000120617 271 ntBASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm23791-201ENSMUST00000122553 293 ntBASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm23184-201ENSMUST00000122594 131 ntBASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm24811-201ENSMUST00000175313 100 ntBASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm24618-201ENSMUST00000177718 94 ntBASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm17522-201ENSMUST00000178144 498 ntBASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm23953-201ENSMUST00000178214 94 ntBASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm26332-201ENSMUST00000179813 94 ntBASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm22863-201ENSMUST00000180265 94 ntBASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm29602-201ENSMUST00000186887 442 ntBASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm28155-201ENSMUST00000191066 151 ntBASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm37338-201ENSMUST00000191986 127 ntBASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm45513-201ENSMUST00000210228 376 ntBASIC3.75□□□□□ -1.81
Brf1Q8CFK2 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Brf1Q8CFK2 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 164.4 ms