Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Gm19118-201ENSMUST00000222554 98 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Gm25257-201ENSMUST00000083907 110 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.31□□□□□ -2.04
Trim3Q9R1R2 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm12370-201ENSMUST00000117809 604 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm11845-201ENSMUST00000117886 327 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm6568-201ENSMUST00000122274 697 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm25321-201ENSMUST00000122558 102 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm26414-201ENSMUST00000157674 269 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm22483-201ENSMUST00000157986 274 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm20656-201ENSMUST00000176925 518 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm20794-201ENSMUST00000177626 628 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm21744-201ENSMUST00000178403 662 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm21171-201ENSMUST00000180048 673 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm28900-201ENSMUST00000185232 156 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm29413-201ENSMUST00000186019 880 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm28399-201ENSMUST00000186221 318 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm28572-201ENSMUST00000187444 318 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm28700-201ENSMUST00000187614 579 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm29639-201ENSMUST00000188375 580 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm28843-201ENSMUST00000189198 678 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm29546-201ENSMUST00000191171 678 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm18296-201ENSMUST00000192475 783 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm44966-201ENSMUST00000208096 157 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 AC114916.1-201ENSMUST00000228465 494 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm9762-201ENSMUST00000036976 444 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm25586-201ENSMUST00000082499 112 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm22572-201ENSMUST00000082985 105 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.3□□□□□ -2.04
Trim3Q9R1R2 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm13602-201ENSMUST00000122405 493 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm26105-201ENSMUST00000157253 190 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm22851-201ENSMUST00000178741 94 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm25074-201ENSMUST00000178782 94 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Mir7j-201ENSMUST00000184427 122 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm29335-201ENSMUST00000188361 459 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm7837-201ENSMUST00000190873 412 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm37869-201ENSMUST00000193385 595 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm43722-201ENSMUST00000196054 124 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm43402-201ENSMUST00000197159 159 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Mir7232-201ENSMUST00000197929 74 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm44011-201ENSMUST00000203336 394 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm2676-201ENSMUST00000207279 606 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm45878-201ENSMUST00000211839 241 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm26494-201ENSMUST00000083154 143 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm24493-201ENSMUST00000083805 143 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Gm22154-201ENSMUST00000083844 131 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Trim3Q9R1R2 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Trim3Q9R1R2 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trim3Q9R1R2 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Gm22831-201ENSMUST00000102473 109 ntBASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Gm23803-201ENSMUST00000104610 132 ntBASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Gm15846-201ENSMUST00000116022 320 ntBASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Gm14558-201ENSMUST00000117458 381 ntBASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Gm13880-201ENSMUST00000118421 474 ntBASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Gm14362-201ENSMUST00000121679 273 ntBASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Gm11471-201ENSMUST00000121824 198 ntBASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Gm15077-201ENSMUST00000122344 362 ntBASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Gm14629-201ENSMUST00000122428 144 ntBASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Gm24839-201ENSMUST00000122602 107 ntBASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Gm15254-201ENSMUST00000149567 273 ntBASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Gm8114-201ENSMUST00000172225 484 ntBASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Gm23933-201ENSMUST00000178405 79 ntBASIC2.28□□□□□ -2.04
Trim3Q9R1R2 Gm22166-201ENSMUST00000178419 121 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 142.3 ms