Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm20923-201ENSMUST00000190009 319 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm28951-201ENSMUST00000190742 313 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm18384-201ENSMUST00000195974 808 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm42925-201ENSMUST00000197359 285 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm5358-201ENSMUST00000212814 353 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm45815-201ENSMUST00000220241 146 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm23629-201ENSMUST00000082465 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm23924-201ENSMUST00000082474 108 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm22246-201ENSMUST00000082478 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm22749-201ENSMUST00000082490 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm22747-201ENSMUST00000082495 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm23296-201ENSMUST00000082555 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm22063-201ENSMUST00000082560 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm26129-201ENSMUST00000082719 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm24859-201ENSMUST00000082729 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm23057-201ENSMUST00000082801 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm26328-201ENSMUST00000082821 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm26331-201ENSMUST00000082824 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm24205-201ENSMUST00000082953 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm25405-201ENSMUST00000082973 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm22628-201ENSMUST00000082988 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm26324-201ENSMUST00000083073 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm24535-201ENSMUST00000083140 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm26496-201ENSMUST00000083150 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm26127-201ENSMUST00000083193 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm24456-201ENSMUST00000083198 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm24458-201ENSMUST00000083204 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm24018-201ENSMUST00000083232 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm25794-201ENSMUST00000083286 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm25790-201ENSMUST00000083293 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm22295-201ENSMUST00000083311 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm25127-201ENSMUST00000083336 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm25583-201ENSMUST00000083413 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm25577-201ENSMUST00000083414 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm24414-201ENSMUST00000083434 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm24861-201ENSMUST00000083459 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm24803-201ENSMUST00000083693 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm23103-201ENSMUST00000083725 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm22580-201ENSMUST00000083727 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm24260-201ENSMUST00000083741 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm23732-201ENSMUST00000083751 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm22682-201ENSMUST00000083854 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm25869-201ENSMUST00000083855 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm24693-201ENSMUST00000083885 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm26317-201ENSMUST00000083894 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm22352-201ENSMUST00000083917 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm24448-201ENSMUST00000083979 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm22798-201ENSMUST00000083992 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm26427-201ENSMUST00000093648 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm22886-201ENSMUST00000093714 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Gm22170-201ENSMUST00000097247 107 ntBASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Brf1Q8CFK2 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Brf1Q8CFK2 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.8□□□□□ -1.8
Brf1Q8CFK2 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Brf1Q8CFK2 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.8□□□□□ -1.8
Brf1Q8CFK2 Gm22115-201ENSMUST00000103976 133 ntBASIC3.8□□□□□ -1.8
Brf1Q8CFK2 Gm23923-201ENSMUST00000104108 133 ntBASIC3.8□□□□□ -1.8
Brf1Q8CFK2 Gm8840-201ENSMUST00000122454 386 ntBASIC3.8□□□□□ -1.8
Brf1Q8CFK2 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
Brf1Q8CFK2 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.8□□□□□ -1.8
Brf1Q8CFK2 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Brf1Q8CFK2 Gm43529-201ENSMUST00000199178 412 ntBASIC3.8□□□□□ -1.8
Brf1Q8CFK2 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.8□□□□□ -1.8
Brf1Q8CFK2 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.8□□□□□ -1.8
Brf1Q8CFK2 Gm22245-201ENSMUST00000082479 103 ntBASIC3.8□□□□□ -1.8
Brf1Q8CFK2 Gm22739-201ENSMUST00000083437 160 ntBASIC3.8□□□□□ -1.8
Brf1Q8CFK2 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.8□□□□□ -1.8
Brf1Q8CFK2 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Brf1Q8CFK2 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Gm13717-201ENSMUST00000119868 365 ntBASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Gm13903-201ENSMUST00000120945 193 ntBASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Gm6265-201ENSMUST00000149263 231 ntBASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Gm26400-201ENSMUST00000175012 85 ntBASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Gm24085-201ENSMUST00000175172 116 ntBASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Gm34073-201ENSMUST00000195736 212 ntBASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Gm43932-201ENSMUST00000204499 52 ntBASIC3.79□□□□□ -1.8
Brf1Q8CFK2 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.79□□□□□ -1.8
Brf1Q8CFK2 LOC667541-201ENSMUST00000223408 278 ntBASIC3.79□□□□□ -1.8
Brf1Q8CFK2 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.79□□□□□ -1.8
Brf1Q8CFK2 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.79□□□□□ -1.8
Brf1Q8CFK2 AC170600.1-201ENSMUST00000228763 277 ntBASIC3.79□□□□□ -1.8
Brf1Q8CFK2 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC3.79□□□□□ -1.8
Brf1Q8CFK2 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Brf1Q8CFK2 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 164.7 ms