Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm22676-201ENSMUST00000116972 129 ntBASIC4.2□□□□□ -1.74
Ubp1Q811S7 Gm9119-201ENSMUST00000118866 495 ntBASIC4.2□□□□□ -1.74
Ubp1Q811S7 Gm15183-201ENSMUST00000118933 348 ntBASIC4.2□□□□□ -1.74
Ubp1Q811S7 Gm8200-201ENSMUST00000122390 222 ntBASIC4.2□□□□□ -1.74
Ubp1Q811S7 Gm25913-201ENSMUST00000157617 135 ntBASIC4.2□□□□□ -1.74
Ubp1Q811S7 Gm22348-201ENSMUST00000178674 79 ntBASIC4.2□□□□□ -1.74
Ubp1Q811S7 Gm27220-201ENSMUST00000183453 262 ntBASIC4.2□□□□□ -1.74
Ubp1Q811S7 Gm29479-201ENSMUST00000190352 455 ntBASIC4.2□□□□□ -1.74
Ubp1Q811S7 Gm18462-201ENSMUST00000208112 417 ntBASIC4.2□□□□□ -1.74
Ubp1Q811S7 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC4.2□□□□□ -1.74
Ubp1Q811S7 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.2□□□□□ -1.74
Ubp1Q811S7 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ubp1Q811S7 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
Ubp1Q811S7 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ubp1Q811S7 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.2□□□□□ -1.74
Ubp1Q811S7 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.2□□□□□ -1.74
Ubp1Q811S7 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
Ubp1Q811S7 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ubp1Q811S7 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.19□□□□□ -1.74
Ubp1Q811S7 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ubp1Q811S7 Mir1b-201ENSMUST00000117012 122 ntBASIC4.19□□□□□ -1.74
Ubp1Q811S7 Gm13419-201ENSMUST00000121711 271 ntBASIC4.19□□□□□ -1.74
Ubp1Q811S7 Gm23789-201ENSMUST00000122536 301 ntBASIC4.19□□□□□ -1.74
Ubp1Q811S7 Gm22537-201ENSMUST00000158172 199 ntBASIC4.19□□□□□ -1.74
Ubp1Q811S7 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ubp1Q811S7 Mir6963-201ENSMUST00000183535 71 ntBASIC4.19□□□□□ -1.74
Ubp1Q811S7 Gm27580-201ENSMUST00000183666 149 ntBASIC4.19□□□□□ -1.74
Ubp1Q811S7 Gm27921-201ENSMUST00000183968 108 ntBASIC4.19□□□□□ -1.74
Ubp1Q811S7 Gm27286-201ENSMUST00000184934 179 ntBASIC4.19□□□□□ -1.74
Ubp1Q811S7 Gm38183-201ENSMUST00000193189 205 ntBASIC4.19□□□□□ -1.74
Ubp1Q811S7 Gm25856-201ENSMUST00000082786 75 ntBASIC4.19□□□□□ -1.74
Ubp1Q811S7 Snord22-201ENSMUST00000083153 126 ntBASIC4.19□□□□□ -1.74
Ubp1Q811S7 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
Ubp1Q811S7 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ubp1Q811S7 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ubp1Q811S7 Gm37061-201ENSMUST00000195066 3243 ntBASIC4.19□□□□□ -1.74
Ubp1Q811S7 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ubp1Q811S7 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm43889-201ENSMUST00000203950 3681 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm25728-201ENSMUST00000104525 159 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm25726-201ENSMUST00000104529 129 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm14803-201ENSMUST00000117163 361 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm11874-201ENSMUST00000117437 130 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm11460-201ENSMUST00000118200 361 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm14652-201ENSMUST00000118479 235 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm14922-201ENSMUST00000121131 163 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm26279-201ENSMUST00000157095 102 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm22215-201ENSMUST00000157558 96 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm27476-201ENSMUST00000183366 104 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Mir6370-201ENSMUST00000183510 120 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Mir6537-201ENSMUST00000184150 110 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm27465-201ENSMUST00000184290 91 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm29022-201ENSMUST00000190702 225 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm7093-201ENSMUST00000223004 581 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 AC124524.1-201ENSMUST00000225833 181 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm22443-201ENSMUST00000082890 107 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm25147-201ENSMUST00000083030 105 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm23462-201ENSMUST00000083264 104 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm26327-201ENSMUST00000093724 111 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Ubp1Q811S7 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Ubp1Q811S7 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Ubp1Q811S7 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ubp1Q811S7 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ubp1Q811S7 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
Ubp1Q811S7 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.18□□□□□ -1.74
Ubp1Q811S7 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ubp1Q811S7 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
Ubp1Q811S7 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ubp1Q811S7 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ubp1Q811S7 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Ubp1Q811S7 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Ubp1Q811S7 Mir761-201ENSMUST00000103245 76 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC4.17□□□□□ -1.74
Ubp1Q811S7 Gm6079-201ENSMUST00000121356 404 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 Gm14916-201ENSMUST00000121904 204 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 Gm11204-201ENSMUST00000122438 147 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 Gm22726-201ENSMUST00000158089 179 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 Gm24056-201ENSMUST00000158617 146 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 Gm28118-201ENSMUST00000185957 294 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 Gm6802-202ENSMUST00000186566 126 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 Gm29428-201ENSMUST00000190086 409 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 Gm19790-201ENSMUST00000214414 251 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 Gm24966-201ENSMUST00000082443 79 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 Mir383-201ENSMUST00000083523 70 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 Mir103-2-201ENSMUST00000083629 86 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.17□□□□□ -1.74
Ubp1Q811S7 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Ubp1Q811S7 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ubp1Q811S7 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ubp1Q811S7 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ubp1Q811S7 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ubp1Q811S7 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
Ubp1Q811S7 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.16□□□□□ -1.74
Ubp1Q811S7 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 151.6 ms